Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value seq14219 84.2 6e-12 >seq14219 Length=2704 Score = 84.2 bits (92), Expect = 6e-12 Identities = 224/339 (66%), Gaps = 14/339 (4%) Strand=Plus/Minus Query 16140 AACGGCACCTGGCTGGGGACGTTTAAATGGGCATGGACTGATAATCCGGCCTGGATTTTT 16199 ||||||| ||| || || || ||| ||| | || | || ||||||||||| || Sbjct 1791 AACGGCATTTGGGATGGCACATTCAAAGAGGCCTATACCAACAACCCGGCCTGGATCTTC 1732 Query 16200 TACGATCTGGTGGTGAGTGACC---GCTTTGGCCTTGGCGACCGCCT-GACGGCAGCAAA 16255 ||||| ||||| || ||| || ||||| ||||||||| | ||| ||| ||| Sbjct 1731 TACGACTTGGTGCTG---CACCCATACTACGGCCTCGGCGACCGCATCGAC-GCAACAAT 1676 Query 16256 TATTGATAAATGGACGCTTTACCAGGTTGCACAATATTGCGATCAGCCGGTACCAGACGG 16315 ||||| ||| |||| || | | | || || || ||||| ||| ||| || ||||| Sbjct 1675 GGTTGATCGCTGGTCGCTCTATCGGATCGCGCAGTACTGCGACCAGATGGTGCCGGACGG 1616 Query 16316 AAAAGGCGGTTCCGGCACCGAGCCTCGCTATACCTGTAACGTGTATGTGCAGGAGAGGAA 16375 ||| || |||| ||||| |||| |||||| ||| |||| | ||| || Sbjct 1615 AAAGGG------GGGCATGGAGCCACGCTTTACCTGCAACTTGTACTTCCAGAAGCAAGC 1562 Query 16376 TGACGCTTATACCGTTTTGCGTGATTTTGCGGCCATATTCCGTGGCATGACGTACTGGGG 16435 ||| |||||| | || | | || | || | || |||| ||| || | ||||||| Sbjct 1561 TGAAGCTTATGCAGTGCTCCAGGACCTGGCCTCGATCTTCCACGGCCTGGCCTACTGGGA 1502 Query 16436 CGGCGATCAAATCGTTGCGCTGGCTGATATGCCCCGCGA 16474 ||| || ||||| | || |||||||| |||| Sbjct 1501 CGGAAGCCAGATCGTGGTCAACGCCGATATGCCGGGCGA 1463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148224320365322