Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_001901.1
Length=46375
Score E
Sequences producing significant alignments: (Bits) Value
seq14219 84.2 6e-12
>seq14219
Length=2704
Score = 84.2 bits (92), Expect = 6e-12
Identities = 224/339 (66%), Gaps = 14/339 (4%)
Strand=Plus/Minus
Query 16140 AACGGCACCTGGCTGGGGACGTTTAAATGGGCATGGACTGATAATCCGGCCTGGATTTTT 16199
||||||| ||| || || || ||| ||| | || | || ||||||||||| ||
Sbjct 1791 AACGGCATTTGGGATGGCACATTCAAAGAGGCCTATACCAACAACCCGGCCTGGATCTTC 1732
Query 16200 TACGATCTGGTGGTGAGTGACC---GCTTTGGCCTTGGCGACCGCCT-GACGGCAGCAAA 16255
||||| ||||| || ||| || ||||| ||||||||| | ||| ||| |||
Sbjct 1731 TACGACTTGGTGCTG---CACCCATACTACGGCCTCGGCGACCGCATCGAC-GCAACAAT 1676
Query 16256 TATTGATAAATGGACGCTTTACCAGGTTGCACAATATTGCGATCAGCCGGTACCAGACGG 16315
||||| ||| |||| || | | | || || || ||||| ||| ||| || |||||
Sbjct 1675 GGTTGATCGCTGGTCGCTCTATCGGATCGCGCAGTACTGCGACCAGATGGTGCCGGACGG 1616
Query 16316 AAAAGGCGGTTCCGGCACCGAGCCTCGCTATACCTGTAACGTGTATGTGCAGGAGAGGAA 16375
||| || |||| ||||| |||| |||||| ||| |||| | ||| ||
Sbjct 1615 AAAGGG------GGGCATGGAGCCACGCTTTACCTGCAACTTGTACTTCCAGAAGCAAGC 1562
Query 16376 TGACGCTTATACCGTTTTGCGTGATTTTGCGGCCATATTCCGTGGCATGACGTACTGGGG 16435
||| |||||| | || | | || | || | || |||| ||| || | |||||||
Sbjct 1561 TGAAGCTTATGCAGTGCTCCAGGACCTGGCCTCGATCTTCCACGGCCTGGCCTACTGGGA 1502
Query 16436 CGGCGATCAAATCGTTGCGCTGGCTGATATGCCCCGCGA 16474
||| || ||||| | || |||||||| ||||
Sbjct 1501 CGGAAGCCAGATCGTGGTCAACGCCGATATGCCGGGCGA 1463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148224320365322
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |