Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq15011 91.5 3e-13
>seq15011
Length=1793066
Score = 91.5 bits (100), Expect = 3e-13
Identities = 102/133 (77%), Gaps = 4/133 (3%)
Strand=Plus/Minus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|||||||| ||||| ||| | ||||| || |||||||| ||||||||| | || || ||
Sbjct 666682 GCATTTTTCGGAGCCCAGATGAATTCCTTCATCCATGTGATTATGTACTCATACTACGGG 666623
Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174
| | || | ||| || ||| ||||||| |||||| ||||||||||| || || || |
Sbjct 666622 TTAACTGCCTTTGGCCC-ATGGATTCAGAA-GTATCTTTGGTGGAAACGATACCTGACCA 666565
Query 52175 TAATGCAGTTGGT 52187
| ||||| ||||
Sbjct 666564 TGCTGCAGCTGGT 666552
Score = 86.0 bits (94), Expect = 1e-11
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 51901 TGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCATACTTAGG 51960
|||| ||||| ||| || ||||| || || || || || || |||||||| || || |||
Sbjct 667898 TGGTGGTACTTTATTTCTAAAGGAATTGAGTATTTTGACACAGTATTTTTTATCCTGAGG 667839
Query 51961 AAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGTTTACTCTA 52020
|| ||| || || | || || || ||||||||||| | ||| |||||||| |
Sbjct 667838 AAGAAAAACAACCAAATCTCCTTCCTTCATGTATATCATCACTGTACAATGTTTACATTG 667779
Query 52021 GGATGGATAGGTATTAAATGGTTTGCTGGAGGTCAGG 52057
| ||||| || ||||| ||| | || || || ||||
Sbjct 667778 TGGTGGATTGGAATTAAGTGGGTCGCAGGGGGACAGG 667742
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 922842373208520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |