Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_002371.2
Length=41724
Score E
Sequences producing significant alignments: (Bits) Value
seq9203 358 2e-94
>seq9203
Length=13179
Score = 358 bits (396), Expect = 2e-94
Identities = 666/970 (69%), Gaps = 12/970 (1%)
Strand=Plus/Minus
Query 19775 TGTAAATTCTACCAATATATTCTCCAAGAATACCTATTCCTATCAATTGAACGCCACCCA 19834
|||| || | || |||||||| || || | ||| || ||||||||||||| |||||| |
Sbjct 11488 TGTATATGCGCCCGATATATTCACCCAGCACACCAATACCTATCAATTGAATGCCACCAA 11429
Query 19835 GGAAAAGAACAGAAACAAGAAGAGACGGGTAGCCAGGAACATTATTTCCAAATATTAATT 19894
| || |||| || || || || || || || ||||| ||| ||| || | || | ||
Sbjct 11428 GAAACAGAATGGAGACGAGTAGCGATGGATAACCAGGCACAGCATTACCCCAGATAACTT 11369
Query 19895 TATCAATAATCATCCATGCACCGTAAAGGAATGA-CA--TACCTGCAATAAACAATCCAA 19951
||||||| | ||| | ||| || | ||||| || || || | |||||| || |
Sbjct 11368 TATCAATTACCATGAAGCTACCATACAAAAATGAGCAGGTA---GCCACAAACAACCCTA 11312
Query 19952 TGTAAGTCCATATGCGGAGCGGAAATGTTGAGAAAGAAGTTATTCCCTCCAGCGCCAGGT 20011
|| ||||||| | || || | | ||| || |||||||| || | |||||| |
Sbjct 11311 AATATGTCCATACTCTTAGAGGTACAGATGAAAAGCTGGTTATTCCTTCAATCGCCAGAT 11252
Query 20012 TCCATAATTTCCAGCCGTTGAATTTCGAATCACCGGCCACGCGTTCGGCACGGGCATATT 20071
|||||||||||||||| || || || ||||| || || | ||| || | | ||||
Sbjct 11251 TCCATAATTTCCAGCCATTAAACTTTGAATCCCCAGCAGACCTTTCTGCTCTAGAGTATT 11192
Query 20072 TAACAACATCCGTTTTTCCGCCAACCCAACTGAGCACACCC--TTCATAAACAAGTTGCG 20129
||| | || | ||||||| |||| ||| | | || ||||||||||| |||||
Sbjct 11191 CAACCAGTTCAATATTTCCGCTTGCCCA--TGACAATATCCCTTTCATAAACAAATTGCG 11134
Query 20130 TTCTGGCATTTGTTTGATGTTCTCGACAACCGCACGGCTCATTAACCGAAAGTCGCCAAC 20189
|| |||| | || | || ||||| || | | ||||| || || || || ||
Sbjct 11133 CTCAGGCAGCAGCTTAACATTTTCGACTGCCTCTCTTGACATTAGTCGGAAATCACCTAC 11074
Query 20190 ATTTTCTTCGATTTTTGGATTGCTGATTTTATTGTG-CAGCTTATAAAACCACTCAGCTG 20248
||| ||||| ||| | || | |||||||||||||| || || |||||||||||| ||||
Sbjct 11073 ATTCTCTTCAATTCTCGGCGTACTGATTTTATTGTGGCATCT-ATAAAACCACTCGGCTG 11015
Query 20249 TCTTACGCTTCATGCGCCCGTCAGTTGAGCGGTCTGAGCGCTTAGCCAGCACCATATCCG 20308
| || | |||| | || | ||||| || | ||||| || | ||| | ||| |
Sbjct 11014 TTTTCCTTTTCAACCAGTTTTCTTTAGAGCGATCAGTACGCTTGGCTAACACTACATCAG 10955
Query 20309 CGCCAGCCTGCCACTTCTCAATGAGATGAGGGATAACTTCTATCGGATCCTGTAAATCGA 20368
| || |||||| || ||| || | || || ||||| || |||||||| | ||| |
Sbjct 10954 CCCCTAACTGCCATTTTCTAATAAGCTCTGGAATTACTTCAATGGGATCCTGAAGATCTA 10895
Query 20369 CATCAATAGGAATGACCGCATCCCCGGTTGCATGGTCGAGACCCGCGAAAAGAGCAGGTT 20428
||||||| ||||| || ||||| || || |||| || | ||| || || || || || |
Sbjct 10894 CATCAATTGGAATTACAGCATCTCCAGTCGCATATTCTATACCAGCAAATAGCGCTGGCT 10835
Query 20429 CTTTACCGAAGTTTCGCGTAAACGAAAGCGGAATAACGAGCGGATCAGATGCAGCTATTT 20488
|||||||||| ||||| || || |||| || || || ||| | | || ||
Sbjct 10834 CTTTACCGAAATTTCGGGTGAAGCTTAGCGCCATCACTAGACAATCTGCAGTCGCATATT 10775
Query 20489 TGTTAATTATTGATTCAGTCGCATCTTTACTACCATCATTAATAAAAACGATCTCAATTT 20548
| ||||| || | || || ||||| | |||||| ||||| || || | || || | ||
Sbjct 10774 TATTAATAATCAACTCTGTTGCATCGTGACTACCGTCATTTATGAAGATTATTTCTACTT 10715
Query 20549 CATATTCTTTTAGCTCATTAAACTCACGTACCGTTTTATAGAAAATCGGTATCGTGTCTT 20608
|||| || | | ||| || ||||| || | ||||||||| || ||||| | ||||
Sbjct 10714 CATACTCGCTCAACTCTTTGTTTTCACGAACGGCTTTATAGAAGATAGGTATTGCATCTT 10655
Query 20609 CTTCGTTAAAAACTGGAACGACAAGAGAGATTTTCATCTTATATCCCTGAAAACAATGAA 20668
|||| || ||||| || || || | || |||||||| || |||| | |||||||| |
Sbjct 10654 CTTCATTGAAAACAGGTACAACCAATGATATTTTCATTTTTTATCTTTAAAAACAATCAG 10595
Query 20669 TCTGGAATAGATAAAGCCGCATACCAGGCTAATTGCCGAGAAAGTGATAAGGGTAATCAA 20728
| | || || | || || | || ||||||||| || || || || || || | |
Sbjct 10594 TTTTGAGTAAAAGAATCCCACAATCAAGCTAATTGCAGAAAATGTTATCAGCGTTAAAAT 10535
Query 20729 TGGTGGCAAG 20738
||| | ||||
Sbjct 10534 TGGCGTCAAG 10525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133346548519516
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |