Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq4839 111 1e-19
seq20241 100 2e-16
seq5365 86.0 4e-12
>seq4839
Length=4080137
Score = 111 bits (122), Expect = 1e-19
Identities = 153/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236
||| |||||||| | ||| ||||||||| ||||||||||| ||||| || | ||
Sbjct 529858 CAGGACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 529799
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|||| ||| || || || || ||||||| ||||||||| ||| | || |||||||||
Sbjct 529798 TTCCAGCTGTTTCCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 529739
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 529738 CTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 529679
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| ||||| || || ||||| ||||||||||||
Sbjct 529678 CTTACCGGTCAGGGTCTTCACGAAGATCTGCATC 529645
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | || |||||||| |||||||| || || || ||| | ||
Sbjct 528945 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 528886
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| || || || ||||| |||| ||||||||| ||| | || |||||||||
Sbjct 528885 TCCAGCTGTTTCCCGGCAAAAATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 528826
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 528825 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 528766
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| ||||| || || ||||| ||||||||||||
Sbjct 528765 TTACCGGTCAGGGTCTTCACGAAGATCTGCATC 528733
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | || |||||||| |||||||| || || || ||| | ||
Sbjct 529401 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 529342
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| || || || || ||||||| ||||||||| ||| | || |||||||||
Sbjct 529341 TCCAGCTGTTTCCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 529282
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 529281 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 529222
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| ||||| || || ||||| ||||||||||||
Sbjct 529221 TTACCGGTCAGGGTCTTCACGAAGATCTGCATC 529189
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | || |||||||| |||||||| || || || ||| | ||
Sbjct 529173 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 529114
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| ||||| || || || | || ||||||||| ||| | || |||||||||
Sbjct 529113 TCCAGCTGTTTGCCCGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 529054
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 529053 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 528994
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| ||||| || || ||||| ||||||||||||
Sbjct 528993 TTACCGGTCAGGGTCTTCACGAAGATCTGCATC 528961
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | || |||||||| |||||||| || || || ||| | ||
Sbjct 529629 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 529570
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| ||||| || || || | || ||||||||| ||| | || |||||||||
Sbjct 529569 TCCAGCTGTTTGCCCGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 529510
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 529509 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 529450
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| ||||| || || ||||| ||||||||||||
Sbjct 529449 TTACCGGTCAGGGTCTTCACGAAGATCTGCATC 529417
>seq20241
Length=2711202
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | || |||||||| |||||||| || || || ||| | ||
Sbjct 1753143 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCT 1753202
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| |||||||| || ||||||| ||||||||| ||| | || ||||| ||
Sbjct 1753203 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCC 1753262
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 1753263 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 1753322
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||||||| || || ||||| ||||||||||||
Sbjct 1753323 TTGCCGGTCAGGGTCTTCACGAAGATCTGCATC 1753355
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | || |||||||| |||||||| || || || ||| | ||
Sbjct 1753371 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCT 1753430
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| |||||||| || ||||||| ||||||||| ||| | || ||||| ||
Sbjct 1753431 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCC 1753490
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 1753491 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 1753550
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||||||| || || ||||| ||||||||||||
Sbjct 1753551 TTGCCGGTCAGGGTCTTCACGAAGATCTGCATC 1753583
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | || |||||||| |||||||| || || || ||| | ||
Sbjct 1753599 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCT 1753658
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| |||||||| || ||||||| ||||||||| ||| | || ||||| ||
Sbjct 1753659 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCC 1753718
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 1753719 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 1753778
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||||||| || || ||||| ||||||||||||
Sbjct 1753779 TTGCCGGTCAGGGTCTTCACGAAGATCTGCATC 1753811
>seq5365
Length=1496801
Score = 86.0 bits (94), Expect = 4e-12
Identities = 162/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||||||| ||| | ||| |||| ||| || || ||||| |||
Sbjct 701806 CCACCTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTCCTGGATATTATAGTCTGAC 701865
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || | || ||| ||||| | |||||| || ||||||||||| | | |
Sbjct 701866 AGAGTGCGGCCATCCTTCAGCTGTTTGCCCGTGAAAATCAGACGCTGCTGGTC-AGGTGG 701924
Query 34283 AC-GCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340
|| || ||||||||| || ||| ||||| | || | | | || | | ||||
Sbjct 701925 ACTGCCCTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCAGTGGTGTCACTGGGCTCGA 701983
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393
|| | |||||||| ||||| | | || |||||||||||||||||| ||
Sbjct 701984 TCTCTAGAGTGATGGTCTTGCCCATCAAGGTCTTCACAAAGATCTGCATCTCT 702036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322951069405280
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