Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq17315 2012 0.0
seq8192 100 2e-16
>seq17315
Length=6091571
Score = 2012 bits (2230), Expect = 0.0
Identities = 1479/1727 (86%), Gaps = 46/1727 (3%)
Strand=Plus/Minus
Query 107068 CCAG-TCCTAACTCCAGTCCCAGCATGACTAGCTGGTTTGCAGCATCAGGTTACAGATGT 107126
|||| |||| | |||| | ||||||||| ||||||| || || ||||| || ||| |
Sbjct 3407431 CCAGATCCTGATTCCAATGCCAGCATGATCAGCTGGTCTGTAGTGTCAGGCTATAGACCT 3407372
Query 107127 CCATCCACAAG-------------GGTCTTAGGCAGGACTTGACTGAGGATATTTGTCTA 107173
||||| || | || ||||||||||||||| ||||||| |||||||
Sbjct 3407371 CCATCAGTGAGCTGGGTGTATGAAGATCCTAGGCAGGACTTGACCGAGGATAGTTGTCTA 3407312
Query 107174 TAGAAGACATCTATCTTTACCATCACTCTGGAGTTGAACTTGATGTTC--------TG-- 107223
|||||| | |||| ||| |||||||| |||||||| ||||||||||| ||
Sbjct 3407311 GAGAAGAAACCTATTTTTGCCATCACTTTGGAGTTGCACTTGATGTTCCTTGAGCATGTT 3407252
Query 107224 ---GATTAGTTTGTAATTAAAGGCATTTTGTTCTGTCCAAGGATCTCCTCCTCCACCTTG 107280
| ||||||||||| | ||||||||||||||||||||||||| || |||||| ||||
Sbjct 3407251 CCAGGTTAGTTTGTAACTGAAGGCATTTTGTTCTGTCCAAGGATTTCATCCTCCTCCTTC 3407192
Query 107281 CCTGTGCCCAAACTCTCCTGATCTCCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGC 107340
||||||||| |||||| |||||||||| ||||||||||| ||||||||||||||| |
Sbjct 3407191 CCTGTGCCCGAACTCTATCGATCTCCCATTCCATGAAGATGATTGGGTGGAAGAAGAAAC 3407132
Query 107341 TTTGCCGGGGACATCATCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTC 107400
| ||| |||| ||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3407131 TCTGCAGGGGGCATCACCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTGCTC 3407072
Query 107401 TGAGACTTTCCCTCAGGTTTAAATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACT 107460
|||||||||| |||||||| |||||||| |||||||| |||||||||| ||||||||||
Sbjct 3407071 TGAGACTTTCTCTCAGGTTAAAATGTGACATAGATTCCCTGGATCTGGAATCCAGGGACT 3407012
Query 107461 TCCAGAGTCAGCACTGTAGGGACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGAT 107520
| | || |||| |||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 3407011 TTCGAAGCCAGCGCTGTAGGGACATCTTGTACAAGTCCCTGAAGCTGCCAGCAAAGAGAT 3406952
Query 107521 CCATCAACTGTTCTGGGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAG 107580
||||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||| |
Sbjct 3406951 CCATCAACTGTTCTGGGGTCACCCGAGGGGACCAGGAAGCAGTGGTCAAGGCTCTCCTGG 3406892
Query 107581 ACAACCTGGAAGTGAAGAAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAA 107640
|||| ||||| || ||||| |||||| |||| |||| | |||| |||||| |||||| |
Sbjct 3406891 ACAATCTGGAGGTCAAGAAGAAGCGGGAGCCTTTCACAGACACCGATTACCACAACATGA 3406832
Query 107641 CCAGAGACTGTGAGCGCTTCAAGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAG 107700
||||||| ||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct 3406831 CCAGAGATTGTGAGCAGTTTAAGTCCCAAAGGAAGTTCATACAGTTCCCACTGAGCAAAG 3406772
Query 107701 AAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTG 107760
||||| ||||||||||||| || ||||| |||||||||||||||||||||||||| ||||
Sbjct 3406771 AAGAGTTAGACTTCCCCATCGCATACTCTATGGTGGTCCATGAGAAGATTGAAAATTTTG 3406712
Query 107761 AACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGA 107820
|||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| ||
Sbjct 3406711 AACGGCTGCTGCGAGCTGTGTATGCCCCTCAGAACATATACTGCGTCCATGTGGATGAGA 3406652
Query 107821 AGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCT 107880
|||||||||| |||||||||||||| |||| ||||||||||||||||||||| |||||||
Sbjct 3406651 AGTCCCCAGAAACTTTCAAAGAGGCAGTCAGGGCCATTATTTCCTGCTTCCCAAATGTCT 3406592
Query 107881 TCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACC 107940
||||||||||||||||||||| ||||||||| |||||||||||||| ||||| |||||||
Sbjct 3406591 TCATGGCCAGTAAGTTGGTCCGGGTGGTTTACGCCTCCTGGTCCAGGGTGCAGGCTGACC 3406532
Query 107941 TGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACAT 108000
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 3406531 TGAACTGTATGGAAGACTTGCTCCAGAGCTCGGTGCCATGGAAATACTTACTGAATACAT 3406472
Query 108001 GCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGA 108060
| |||||||| || || |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 3406471 GTGGGACAGATTTTCCTATAAAGACCAATGCTGAGATGGTCCTGGCCCTCAAGATGTTGA 3406412
Query 108061 AGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAAT 108120
| || ||||||||||||||||| ||| ||||| |||||| |||||| |||||||| ||
Sbjct 3406411 ATGGGAAGAACAGTATGGAGTCCGAGATACCTACTGAGTACAAAAAGTCTCGCTGGAGAT 3406352
Query 108121 ACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTG 108180
||| ||||||||||||||||||| || ||| ||||||||||||||||||||||||||||
Sbjct 3406351 ACCACTATGAGGTGACAGACACATTGCACCTAACCAGCAAGATGAAGGACCCTCCCCCTG 3406292
Query 108181 ATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAAC 108240
|||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 3406291 ATAACTTACCTGTGTTCACAGGGAATGCCTATTTTGTGGCTTCTCGAGCCTTTGTCCAAC 3406232
Query 108241 ATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCC 108300
|||||||||| ||||| ||||||||| ||||| | ||||||| ||||||||||||||||
Sbjct 3406231 ATGTCTTAGAGAACCCCAAATCCCAACGACTGATCGAATGGGCAAAAGACACCTATAGCC 3406172
Query 108301 CCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTA 108360
|||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct 3406171 CCGATGAACACCTCTGGGCCACCCTTCAGCGTGCACCGTGGATGCCCGGCTCTGTCCCCT 3406112
Query 108361 GCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGT 108420
||||||||||| |||||||||||||||| |||| |||||||| ||||| |||||||
Sbjct 3406111 ACCACCCCAAGTTTCACATCTCAGACATGTACACCATTGCCAGGCTGGTCAAATGGCAGT 3406052
Query 108421 ACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGA 108480
||| |||||||| |||| |||||||| |||||||||| |||||||||||||| | |
Sbjct 3406051 TCCATGAGGGAGACATCAGTATGGGGGCATCTTATGCACCTTGCTCTGGAATCCACCAGC 3405992
Query 108481 GGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCT 108540
|||| |||||||||| ||||| ||||||||| |||||||||| ||||| ||||||||||
Sbjct 3405991 GGGCTGTCTGCATTTATGGGGCTGGGGACCTGCACTGGATTCTTCAGAATCATCACCTCT 3405932
Query 108541 TGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACC 108600
|||| |||||||| ||||| | |||||||||||| || ||||||||||||||||||||
Sbjct 3405931 TGGCGAACAAGTTCGACCCAAAGGTGGATGATAATGTTCTGCAGTGCTTAGAAGAGTATT 3405872
Query 108601 TACGTCATAAGGCCATCTATGGGACTGAACTTTGAGCTGCACTGT--------------- 108645
||||| ||||||||||||||||||||||||| |||| | ||| ||
Sbjct 3405871 TACGTTATAAGGCCATCTATGGGACTGAACTCTGAGATACACCGTGAGAGGATTGCTACC 3405812
Query 108646 ---GGGCCAGGGAC-TGTGCCAACATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGG 108701
||| |||| || ||| | ||| ||||||| | | |||| || |||||||||||| |
Sbjct 3405811 CAAGGGGCAGGAACATGTACAAACGTGCCCAGAACATGCTGGGACAGTGTGGGGTGGGAG 3405752
Query 108702 ACGAGGGCTGTGGAATCCATGGCATCCCCCAGGGTCAGAGGGCTGCT 108748
|| ||| || |||||||| ||||||| ||| ||||||| ||||||||
Sbjct 3405751 ACCAGGCCTCTGGAATCCGTGGCATCTCCCTGGGTCAGGGGGCTGCT 3405705
>seq8192
Length=2942228
Score = 100 bits (110), Expect = 2e-16
Identities = 564/891 (63%), Gaps = 33/891 (4%)
Strand=Plus/Minus
Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747
|| || |||||||||||| ||| || || || || || || | ||||| ||| | ||
Sbjct 679835 CCGCTTAGTAAAGAAGAGGCAGAGTTTCCAATAGCATATTCTGTAGTGGTTCATCACAAA 679776
Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807
||||||| |||| |||| ||| ||||| | ||| |||||||| | || || |
Sbjct 679775 ATTGAAATGCTTGACAGGCTCCTGAGAGCCATTTATATGCCTCAGAATTTCTATTGCATT 679716
Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867
||||||||| || || || | || | ||||| | | |||| |||||
Sbjct 679715 CACGTGGATACAAAATCAGAGGAATCCTTTTTGGCCGCGGTGATTGGCATTGCATCCTGT 679656
Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927
||| |||||||| |||||||| || ||| || || ||||| || ||| | |
Sbjct 679655 TTCAGTAATGTCTTTGTGGCCAGTCAGCTGGAGAGTGTTGTGTATGCATCTTGGAGCCGG 679596
Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGC--CATGGAAGT 107985
|| || |||||||| ||||| ||| | ||| | || | || | | || |||||||
Sbjct 679595 GTTCAGGCTGACCTCAACTGCATGCAGGACCT-CTACCGA-ATGAACGCAGACTGGAAGT 679538
Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045
|||| | ||| ||||| | || || || || || ||||| || || ||| |
Sbjct 679537 ACTTGATAAATCTCTGCGGTATGGATTTTCCTATTAAAACCAACCTGGAAATTGTCAGGA 679478
Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAG---GTACCTTCTGAGTCCa 108102
|||||| ||| | ||| |||| | | || | ||| | || || | |
Sbjct 679477 AGCTCAAGTCGTTAATGGGCGAGAATAACCTAGAAACGGAGAGAATGCCATCCAA---TA 679421
Query 108103 aaaaaaaTCGCTGGAAATACCGCTATG-AG--GTGACAGACACACTGTACCCTACCAGCA 108159
||||| | | |||||| | | |||| || |||| | | || || | ||
Sbjct 679420 AAAAAGAAAGGTGGAAAAAGCATTATGCAGTCGTGAATGGAAAGTTG------ACAAACA 679367
Query 108160 AGATGAAGGAC------CCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATT 108213
| || ||| | ||| ||| | | ||| |||| |||| | ||||||||
Sbjct 679366 TGGGGACCGACAAAATACATCCTCCTCTTGAAACACCTCTGTTTTCAGGCAGTGCCTATT 679307
Query 108214 TTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGG 108273
|||||| | | | | ||| | |||| | || || ||| |||| |
Sbjct 679306 TTGTGGTCAGTAGGAGGTATGTGGAGTATGTGCTCGAGAATGAAAAAATACAAAAGTTTA 679247
Query 108274 TTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTG 108333
| || |||| |||||||| || ||||| ||||| | ||||||||||| ||||| | |
Sbjct 679246 TGGAGTGGGCAAAAGACACATACAGCCCGGACGAGTATCTCTGGGCCACTATTCAGAG-G 679188
Query 108334 CTCCGTGGA-TGCCTGGCTCTGT-TCCT--AGCCACCCCAAGTATCACATCTCAGACATG 108389
||| | | | || || || | |||| ||||| ||||| | || || ||||||
Sbjct 679187 ATCCCCGAAGTCCCAGGATCACTGTCCTTAAGCCA---TAAGTACGATATGTCCGACATG 679131
Query 108390 ACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCG 108449
|| || |||||| | ||||||||||||||| || || || | || ||| ||
Sbjct 679130 CACGCAATTGCCAGGTTTGTCAAGTGGCAGTACTTTGAAGGTGACATTTCCAAGGGCGCC 679071
Query 108450 CCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGAC 108509
|| || | || ||| || ||||| | | || | || ||| ||| || || |||
Sbjct 679070 CCCTACCCGCCGTGCAGCGGCATCCACGTGCGCTCCGTGTGTGTTTTCGGAGCGGGTGAC 679011
Query 108510 CTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCG 108560
|| ||||||| | | || ||| | || || |||||||| ||| ||
Sbjct 679010 TTGAACTGGATGTTGCGCGTGCACCACTTGTTCGCCAACAAGTTCGACACG 678960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 348138437872962
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