Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq26173 141 7e-29
>seq26173
Length=4939203
Score = 141 bits (156), Expect = 7e-29
Identities = 376/570 (66%), Gaps = 11/570 (2%)
Strand=Plus/Plus
Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272
|||| |||||||| || | || ||| | ||||| ||||| | ||| | || |||||
Sbjct 2187130 AAGAAGGGGATTTAGGCCTAGTTTATAGCTTTCAGTGGAGGCTTTTGGTGGCCGAATACA 2187189
Query 20273 TTGACATGAACACAAATT-ATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAAT 20331
|| || | |||| ||| || ||||||| ||| ||| | ||||| || ||| |
Sbjct 2187190 AAGATGTGGATTTGAATTTATTCAGGTCAAGGAGCAGACCAACTGCAAAAGGTGATTGAC 2187249
Query 20332 TTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGAT 20391
||| ||||| ||||| | ||||||||||| ||| |||| || ||||| | ||||||
Sbjct 2187250 ACAATCAAAACCAACCCTGAAGACAGAAGAATCATTCTATGTGCTTGGAAT-CGAAAGAT 2187308
Query 20392 GTGCCTTTAATGGCTT-------TGCCTCCATGTCATATGCTATGCCAATTTTACGTTGC 20444
| ||| | || | |||| | || ||| || ||||| || ||||| |
Sbjct 2187309 CTTCCTCTCATACCCCACCACCCTGCCCCTGTGCCATGCCCTTTGCCACTTCTACGTGGT 2187368
Query 20445 TAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCC 20504
|| |||| | ||| || || |||| || || | || | ||| |||||||| |
Sbjct 2187369 GAACCATGACT-GTCCTG-CAGCTGTACCAGAAGTCAGGAGACAGGGGCCTGGGTGTGTC 2187426
Query 20505 TTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564
||||| || || || ||||| ||||| || || ||||||||||| | |||| | ||
Sbjct 2187427 CTTCAACATCGCCAGCTATGCCCTGCTCACCTACATGATTGCACACATCACAGGCCTGAA 2187486
Query 20565 AACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACC 20624
| ||||||| || ||||| | ||||| || || |||||||| |||| | || |
Sbjct 2187487 GCCAGGTGACTCTGTACACACTTTGGGAGATGCACACATTTACCTGGATCACACTGAGCT 2187546
Query 20625 TTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAAC 20684
| ||| | ||| | || || ||| | ||||||| || || | | |
Sbjct 2187547 GCTGAAAATGCAGCTTTAGGGAAAATCAAGGCCTTTCCCAAAGCTCAAAATCCTTGGGAA 2187606
Query 20685 TGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCA 20744
||| | | || | || | || ||||| || ||| | | ||||| || | ||||||
Sbjct 2187607 AGTTGAGAAAATCGATGACCTCAAGGCTGAAGACTTTCAGATTGAAGGCTACAGTCCCCA 2187666
Query 20745 TAATTCAATTCCAATGGAAATGTCTGTTTA 20774
| | ||| |||||||||| |||||||
Sbjct 2187667 TCCCACTATTAAAATGGAAATGGCTGTTTA 2187696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399034579565785
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |