Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq26173 141 7e-29 >seq26173 Length=4939203 Score = 141 bits (156), Expect = 7e-29 Identities = 376/570 (66%), Gaps = 11/570 (2%) Strand=Plus/Plus Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272 |||| |||||||| || | || ||| | ||||| ||||| | ||| | || ||||| Sbjct 2187130 AAGAAGGGGATTTAGGCCTAGTTTATAGCTTTCAGTGGAGGCTTTTGGTGGCCGAATACA 2187189 Query 20273 TTGACATGAACACAAATT-ATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAAT 20331 || || | |||| ||| || ||||||| ||| ||| | ||||| || ||| | Sbjct 2187190 AAGATGTGGATTTGAATTTATTCAGGTCAAGGAGCAGACCAACTGCAAAAGGTGATTGAC 2187249 Query 20332 TTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGAT 20391 ||| ||||| ||||| | ||||||||||| ||| |||| || ||||| | |||||| Sbjct 2187250 ACAATCAAAACCAACCCTGAAGACAGAAGAATCATTCTATGTGCTTGGAAT-CGAAAGAT 2187308 Query 20392 GTGCCTTTAATGGCTT-------TGCCTCCATGTCATATGCTATGCCAATTTTACGTTGC 20444 | ||| | || | |||| | || ||| || ||||| || ||||| | Sbjct 2187309 CTTCCTCTCATACCCCACCACCCTGCCCCTGTGCCATGCCCTTTGCCACTTCTACGTGGT 2187368 Query 20445 TAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCC 20504 || |||| | ||| || || |||| || || | || | ||| |||||||| | Sbjct 2187369 GAACCATGACT-GTCCTG-CAGCTGTACCAGAAGTCAGGAGACAGGGGCCTGGGTGTGTC 2187426 Query 20505 TTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564 ||||| || || || ||||| ||||| || || ||||||||||| | |||| | || Sbjct 2187427 CTTCAACATCGCCAGCTATGCCCTGCTCACCTACATGATTGCACACATCACAGGCCTGAA 2187486 Query 20565 AACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACC 20624 | ||||||| || ||||| | ||||| || || |||||||| |||| | || | Sbjct 2187487 GCCAGGTGACTCTGTACACACTTTGGGAGATGCACACATTTACCTGGATCACACTGAGCT 2187546 Query 20625 TTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAAC 20684 | ||| | ||| | || || ||| | ||||||| || || | | | Sbjct 2187547 GCTGAAAATGCAGCTTTAGGGAAAATCAAGGCCTTTCCCAAAGCTCAAAATCCTTGGGAA 2187606 Query 20685 TGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCA 20744 ||| | | || | || | || ||||| || ||| | | ||||| || | |||||| Sbjct 2187607 AGTTGAGAAAATCGATGACCTCAAGGCTGAAGACTTTCAGATTGAAGGCTACAGTCCCCA 2187666 Query 20745 TAATTCAATTCCAATGGAAATGTCTGTTTA 20774 | | ||| |||||||||| ||||||| Sbjct 2187667 TCCCACTATTAAAATGGAAATGGCTGTTTA 2187696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399034579565785