Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_003315.1
Length=31508
Score E
Sequences producing significant alignments: (Bits) Value
seq15183 96.9 7e-16
seq15155 96.9 7e-16
seq21746 93.3 8e-15
seq24349 80.6 5e-11
>seq15183
Length=4839
Score = 96.9 bits (106), Expect = 7e-16
Identities = 68/78 (87%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 357 TTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACC 416
|||||||||||| || |||||| |||||||||||||||||||||||||||||||
Sbjct 1329 TTGGTGGGTCGTCCGCGACTCGAACGCGGGACCAACGGATTAAAAGTCCGCTGCTCTACC 1388
Query 417 GACTGAGCTAACGACCCA 434
|||||||||||||||||
Sbjct 1389 AACTGAGCTAACGACCCA 1406
Score = 95.1 bits (104), Expect = 2e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417
||||||||||| || |||||| |||||||||||||||||||||||||||||||
Sbjct 1466 TGGTGGGTCGTCCGCGACTCGAACGCGGGACCAACGGATTAAAAGTCCGCTGCTCTACCA 1525
Query 418 ACTGAGCTAACGACCCA 434
|||||||||||||||||
Sbjct 1526 ACTGAGCTAACGACCCA 1542
Score = 93.3 bits (102), Expect = 8e-15
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417
||||||||||| || |||||| |||||||||||||||||||||||||||||||
Sbjct 1602 TGGTGGGTCGTCCGCGACTCGAACGCGGGACCAACGGATTAAAAGTCCGCTGCTCTACCA 1661
Query 418 ACTGAGCTAACGACCC 433
||||||||||||||||
Sbjct 1662 ACTGAGCTAACGACCC 1677
>seq15155
Length=4091
Score = 96.9 bits (106), Expect = 7e-16
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417
|||||||||||| |||||||||||| ||||||| | ||||||| | ||||||||||
Sbjct 2581 TGGTGGGTCGTGTGGGATTCGAACCTACGACCAATTGGTTAAAAGCCAACTGCTCTACCA 2522
Query 418 ACTGAGCTAACGACCCAATTA 438
|||||||||||||||||| ||
Sbjct 2521 ACTGAGCTAACGACCCAAATA 2501
>seq21746
Length=2732
Score = 93.3 bits (102), Expect = 8e-15
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417
|||||||||||| |||||||||||| ||||||| | ||||||| | ||||||||||
Sbjct 1445 TGGTGGGTCGTGTGGGATTCGAACCTACGACCAATTGGTTAAAAGCCAACTGCTCTACCA 1504
Query 418 ACTGAGCTAACGACCC 433
||||||||||||||||
Sbjct 1505 ACTGAGCTAACGACCC 1520
>seq24349
Length=209
Score = 80.6 bits (88), Expect = 5e-11
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 357 TTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACC 416
|||||||| || ||||||||||||||| |||| | |||||| |||| ||||||||||
Sbjct 72 TTGGTGGGCTGTCAAGGATTCGAACCTTGGACCTATTGATTAAGAGTCAACTGCTCTACC 13
Query 417 GACTGAGCTAAC 428
|||||||||||
Sbjct 12 AACTGAGCTAAC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 100667271551820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |