Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_003444.1
Length=37074
Score E
Sequences producing significant alignments: (Bits) Value
seq9203 480 2e-131
>seq9203
Length=13179
Score = 480 bits (532), Expect = 2e-131
Identities = 683/950 (72%), Gaps = 8/950 (1%)
Strand=Plus/Minus
Query 19172 CCTATATATTCACCGAGAACACCAATCCCGATCAGTTGCACTCCACCCAAGAAA-AGTAT 19230
|| ||||||||||| || |||||||| || |||| ||| | ||||| |||||| || ||
Sbjct 11477 CCGATATATTCACCCAGCACACCAATACCTATCAATTGAATGCCACC-AAGAAACAGAAT 11419
Query 19231 TGATACAAGCAGGGAGGGATACCCGCGTACTGGGTTACCAAAGACAAGGGTGTCTATAAT 19290
|| || || || || ||||| || | || | ||||| ||| || | || || |
Sbjct 11418 GGAGACGAGTAGCGATGGATAACCAGGCACAGCATTACCCCAGATAACTTTATCAATTAC 11359
Query 19291 CATCCATGCACCATATAAAAATGAAATGCTTGCAACAAACAAACCTATATAAGTCCATAC 19350
||| | |||||| |||||||| | | || |||||||| |||| ||| ||||||||
Sbjct 11358 CATGAAGCTACCATACAAAAATGAGCAGGTAGCCACAAACAACCCTAAATATGTCCATAC 11299
Query 19351 GCGAAGAGGAAAGGTTGAAAAACTTGTGATACCTTCCAGTGCCAGATTCCATAATTTCCA 19410
| ||||| | | |||||| || || || ||||| | ||||||||||||||||||||
Sbjct 11298 TCTTAGAGGTACAGATGAAAAGCTGGTTATTCCTTCAATCGCCAGATTCCATAATTTCCA 11239
Query 19411 GCCATTAAATTTTGAGATGCCAGCAACGCGCTCTGCGCGTACA-TATTCAACGACATCTG 19469
||||||||| ||||| |||||| | ||||| | || | |||||||| | ||
Sbjct 11238 GCCATTAAACTTTGAATCCCCAGCAGACCTTTCTGCTC-TAGAGTATTCAACCAGTTCAA 11180
Query 19470 TCTGACCACCCACCCAGCTCAGTATGCCTTTCATGAAAAGATTGCGCTCAGGCAACAGTT 19529
| | || | |||| || ||| |||||||| || | |||||||||||||| ||| |
Sbjct 11179 TATTTCCGCTTGCCCATGACAATATCCCTTTCATAAACAAATTGCGCTCAGGCAGCAGCT 11120
Query 19530 TAATGTTCTCCACAACCTCACGAGACATGAGTCGAAAATCTCCGACATTTTCCTCGATCT 19589
||| || || || |||| | ||||| ||||| ||||| || ||||| || || ||
Sbjct 11119 TAACATTTTCGACTGCCTCTCTTGACATTAGTCGGAAATCACCTACATTCTCTTCAATTC 11060
Query 19590 TTGGGGTGCTTATTTTGTTGTGTAACTTATAGAACCACTCAGCTGTCTTACGTTTCAGTC 19649
| || || || ||||| ||||| | |||| |||||||| ||||| || | ||||| |
Sbjct 11059 TCGGCGTACTGATTTTATTGTGGCATCTATAAAACCACTCGGCTGTTTTCCTTTTCAACC 11000
Query 19650 GTCCATCAGTTGAGCGGTCTGAACGTTTAGCAAGCACCATGTCAGCACCTGCCTGCCACT 19709
|| | ||||| || | ||| || || | ||| | ||||| ||| |||||| |
Sbjct 10999 AGTTTTCTTTAGAGCGATCAGTACGCTTGGCTAACACTACATCAGCCCCTAACTGCCATT 10940
Query 19710 TTTCAATAAGATGAGGGATGACCTCAATAGGATCTTGCAGGTCGACATCAATAGGAATTA 19769
|| |||||| | || || || ||||| ||||| || || || |||||||| |||||||
Sbjct 10939 TTCTAATAAGCTCTGGAATTACTTCAATGGGATCCTGAAGATCTACATCAATTGGAATTA 10880
Query 19770 CAGCATCGCCGCTTGCATGGTCTAACCCTGCAAATAAGGCTGGTTCTTTACCAAAGTTGC 19829
||||||| || | |||| |||| || ||||||| ||||| |||||||| || || |
Sbjct 10879 CAGCATCTCCAGTCGCATATTCTATACCAGCAAATAGCGCTGGCTCTTTACCGAAATTTC 10820
Query 19830 GTGTAAATGACAGCGGAACAACTAGTGGGTCTGAAACAGCCAGCGCGTTAATAATTGACT 19889
| || || |||| | ||||| |||| | || |||||||| |||
Sbjct 10819 GGGTGAAGCTTAGCGCCATCACTAGACAATCTGCAGTCGCATATTTATTAATAATCAACT 10760
Query 19890 CTGTGGCATCTTTACTTCCGTCATTTATGAATACAATTTCTACTTCATA-TGGCTTCAAC 19948
|||| ||||| | ||| |||||||||||||| | |||||||||||||| | || |||||
Sbjct 10759 CTGTTGCATCGTGACTACCGTCATTTATGAAGATTATTTCTACTTCATACTCGC-TCAAC 10701
Query 19949 TCTTGGAATTCACGTACCGTTTTATAGAAAACAGGTATCGCTTCTTCTTCATTGAAGACA 20008
|||| | |||||| || | ||||||||| | |||||| || |||||||||||||| |||
Sbjct 10700 TCTTTGTTTTCACGAACGGCTTTATAGAAGATAGGTATTGCATCTTCTTCATTGAAAACA 10641
Query 20009 GGAACGACAAGAGATATTTTCATTTCGCATCCCTAAAGACAATGAACTTTGAATAGACGA 20068
|| || || | ||||||||||||| ||| |||| ||||| | ||||| || | ||
Sbjct 10640 GGTACAACCAATGATATTTTCATTTTTTATCTTTAAAAACAATCAGTTTTGAGTAAAAGA 10581
Query 20069 AACCGCAC-ACCAGACTGATGGCGGAGAAGGTGATAAGAGTGACTATTGG 20117
| || ||| | || || || || || || || || || || | |||||
Sbjct 10580 ATCC-CACAATCAAGCTAATTGCAGAAAATGTTATCAGCGTTAAAATTGG 10532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 118471975506616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |