Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq20241 95.1 1e-14
seq4839 95.1 1e-14
seq10790 91.5 1e-13
seq11056 84.2 2e-11
>seq20241
Length=2711202
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| |||||||| || ||||| ||||| | |||| ||||| |||||||| ||
Sbjct 1753158 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 1753217
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||| || | ||||| || || || |||||||| || || ||| || ||
Sbjct 1753218 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 1753277
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| ||||||||||||| | ||| | ||||||||||||| ||
Sbjct 1753278 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 1753337
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| || |||||
Sbjct 1753338 TTCACGAAGATCTGCAT 1753354
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| |||||||| || ||||| ||||| | |||| ||||| |||||||| ||
Sbjct 1753386 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 1753445
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||| || | ||||| || || || |||||||| || || ||| || ||
Sbjct 1753446 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 1753505
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| ||||||||||||| | ||| | ||||||||||||| ||
Sbjct 1753506 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 1753565
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| || |||||
Sbjct 1753566 TTCACGAAGATCTGCAT 1753582
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| |||||||| || ||||| ||||| | |||| ||||| |||||||| ||
Sbjct 1753614 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 1753673
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||| || | ||||| || || || |||||||| || || ||| || ||
Sbjct 1753674 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 1753733
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| ||||||||||||| | ||| | ||||||||||||| ||
Sbjct 1753734 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 1753793
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| || |||||
Sbjct 1753794 TTCACGAAGATCTGCAT 1753810
>seq4839
Length=4080137
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| |||||||| || ||||| || || || |||| | ||||| |||||||| ||
Sbjct 528702 GTCGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCG 528643
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| ||||||| | ||||| || || || ||||| ||||| || ||| || ||
Sbjct 528642 GCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTTTCCTGGATCTTCCCCTTG 528583
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| ||||||||||||| | || | ||||| || ||||| ||
Sbjct 528582 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTACCAGTCAAGGTC 528523
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| || |||||
Sbjct 528522 TTCACGAAGATCTGCAT 528506
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606
|| |||| || | ||| | || || ||||| || ||||| || || || |||| |
Sbjct 529863 AAGCGCAGGACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGC 529804
Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666
||||| |||||||| || ||| |||| || | ||||| || || || ||||| ||
Sbjct 529803 CCATCTTCCAGCTGTTTCCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCC 529744
Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726
||||| ||| || || | | || | ||||| ||||||||||||| | |||
Sbjct 529743 TTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 529684
Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| ||||| ||||||| || || ||||| || |||||
Sbjct 529683 ATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 529646
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| |||||||| || ||||| ||||| | |||| ||||| |||||||| ||
Sbjct 528930 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGTTTCCCG 528871
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| | ||||| | ||||| || || || ||||| || ||||| ||| || ||
Sbjct 528870 GCAAAAATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 528811
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| ||||||||||||| | ||| | ||||| ||||||| ||
Sbjct 528810 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTC 528751
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| || |||||
Sbjct 528750 TTCACGAAGATCTGCAT 528734
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| |||||||| || ||||| ||||| | |||| ||||| |||||||| ||
Sbjct 529158 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGTTTGCCC 529099
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||||| | ||||| || || || ||||| || ||||| ||| || ||
Sbjct 529098 GCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 529039
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| ||||||||||||| | ||| | ||||| ||||||| ||
Sbjct 529038 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTC 528979
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| || |||||
Sbjct 528978 TTCACGAAGATCTGCAT 528962
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| |||||||| || ||||| ||||| | |||| ||||| |||||||| ||
Sbjct 529386 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGTTTCCCG 529327
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||| || | ||||| || || || ||||| || ||||| ||| || ||
Sbjct 529326 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 529267
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| ||||||||||||| | ||| | ||||| ||||||| ||
Sbjct 529266 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTC 529207
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| || |||||
Sbjct 529206 TTCACGAAGATCTGCAT 529190
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| |||||||| || ||||| ||||| | |||| ||||| |||||||| ||
Sbjct 529614 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGTTTGCCC 529555
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||||| | ||||| || || || ||||| || ||||| ||| || ||
Sbjct 529554 GCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 529495
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| ||||||||||||| | ||| | ||||| ||||||| ||
Sbjct 529494 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTC 529435
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| || |||||
Sbjct 529434 TTCACGAAGATCTGCAT 529418
>seq10790
Length=2053270
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
||||||||||| || ||||| ||||| || |||| |||||| |||||||| ||
Sbjct 1303331 GTAGACTCTTTCTGGATGTTGTAATCAGAAATAGTGCAGCCGTCTTCCAGCTGTTTGCCT 1303272
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| | | || | ||||| || || || ||||||||||| || ||| || ||
Sbjct 1303271 GCAAACGTGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 1303212
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | | | ||||| ||||||||||||| | ||| | |||||||| |||| ||
Sbjct 1303211 ACATTCTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 1303152
Query 139748 TTTACGAATATTTGCATA 139765
|| |||| || ||||||
Sbjct 1303151 TTCCCGAAGATCTGCATA 1303134
>seq11056
Length=1110308
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTG 139620
|||| || ||||| ||||||||||| || || || || | || | ||||| | ||
Sbjct 356852 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAGAGTACGTCCA-TCTTCCCGTTG 356794
Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680
|| |||||| ||||||| | |||||| || ||||| || ||||| ||||| ||| ||
Sbjct 356793 CTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTT 356734
Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
||| | ||| | ||| || | ||| | ||||| | || | ||||| || ||
Sbjct 356733 GGCCATTACATTTTCTATTGTATCCGAGGGTTTGACCTCGAGAGTGATGGTCTTCCCCGT 356674
Query 139741 CAACGTTTTTACGAATATTTGCATA 139765
|| || || ||||| || ||||||
Sbjct 356673 CAGGGTCTTCACGAAAATCTGCATA 356649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495873554829600
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