Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_004681.1
Length=75931
Score E
Sequences producing significant alignments: (Bits) Value
seq1734 302 2e-77
seq8977 284 6e-72
>seq1734
Length=3873
Score = 302 bits (334), Expect = 2e-77
Identities = 561/816 (69%), Gaps = 17/816 (2%)
Strand=Plus/Plus
Query 66685 CATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGG 66744
|||| ||||||||||| | | |||||| ||| ||||| ||||| || || | ||
Sbjct 373 CATTTCCACCGGCTCTCTGGGGCTGGACATCGCGCTGGGTATCGGCGGTCTGCCAAAAGG 432
Query 66745 CCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGC 66804
||| | || |||||||||||||| ||||| ||||| || | || || ||| |
Sbjct 433 CCGTATCGTCGAAATCTACGGCCCGGAATCGTCAGGTAAAACCACGCTCACGCTCTCGGT 492
Query 66805 GGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCT 66864
| ||| | || ||||| || | || | || | | |||| || ||||| | ||
Sbjct 493 CATCGCCGAAGCCCAGAAAAGTGGCGCCACCTGTGCGTTCGTCGATGCCGAGCATGCTCT 552
Query 66865 GGACCCCGAGTACGCCAAGGCG--CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAG 66922
|| || |||||||| ||| || || || || | ||| |||| |||| |||
Sbjct 553 TGATCCGGAGTACGCT--GGCAAACTGGGCGTCAACGTAGACGACCTGCTGGTTTCGCAG 610
Query 66923 CCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGA-GCT 66981
|| ||||| || |||||||| ||||| || ||| | | || ||| | | ||
Sbjct 611 CCTGACACGGGTGAGCAGGCGCTGGAAATTACCGACATGTTGGTACGGTC---CAATGCG 667
Query 66982 GTCCA--TCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGC 67039
||| | || || |||| ||||| |||||||| ||||| || || || ||||||||
Sbjct 668 GTCGACGTCATCATCGTCGACTCCGTGGCGGCGCTGGTACCCAAGGCTGAAATCGAAGGC 727
Query 67040 GACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAG 67099
|| || || |||| ||||| ||| |||| || || || ||||| ||||| ||||||||
Sbjct 728 GAAATGGGTGACATGCACGTGGGCTTGCAGGCTCGTCTGATGTCCCAGGCGCTGCGCAAG 787
Query 67100 CTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAG 67159
|||| || | |||| | | ||||| ||| ||| |||||||| | || |
Sbjct 788 ATCACCGGTAACATCAAGAACGCCAACTGCCTGGTTATCTTCATCAACCAGATCCGTATG 847
Query 67160 AAGATCGGCA--ACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGA 67217
||||||||| | || | || ||||| || |||||||| ||||| || || |||
Sbjct 848 AAGATCGGCGTGATGTTCGGTA--GCCCG---GAAACCACCACCGGCGGCAACGCACTGA 902
Query 67218 GGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATG 67277
|||||| ||||| || ||| |||| |||| |||| || | | ||||||||||| |
Sbjct 903 AGTTCTATGCCTCGGTTCGCCTGGACATCCGCCGCACCGGTGCAGTCAAGGAAGGCGACG 962
Query 67278 AGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACC 67337
||| || || | ||||| || || |||||||||||||| |||| || ||| ||
Sbjct 963 AGGTGGTGGGTAGTGAAACCCGCGTCAAGATCGTCAAGAACAAGGTGGCGCCACCGTTCC 1022
Query 67338 GCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCG 67397
| | || || ||| | ||||||| |||| |||| ||| | | ||| || |||
Sbjct 1023 GTCAAGCGGAATTCCAGATTCTGTACGGCAAGGGTATCTACCGTAACGGTGAAATCATCG 1082
Query 67398 ACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACA 67457
| |||| |||||| ||||||||||| |||| ||||||||||||| || ||| | ||
Sbjct 1083 ATCTGGGCGTGTCTCAGGGCCTGGTCGAGAAATCGGGCGCCTGGTACAGCTACCAAGGCA 1142
Query 67458 AGAACGTCGCTCAGGGCAAGCCCAAGGCCGTCCAGT 67493
| || ||| |||||||||| | || || | | |||
Sbjct 1143 ACAAGATCGGTCAGGGCAAGGCGAATGCTGCCAAGT 1178
>seq8977
Length=2429
Score = 284 bits (314), Expect = 6e-72
Identities = 567/836 (68%), Gaps = 13/836 (2%)
Strand=Plus/Minus
Query 66686 ATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGC 66745
||| |||| |||||| | | ||||||| ||| || ||||| || || || | |||
Sbjct 2110 ATTTCCACTGGCTCTCTGGGTCTGGACATCGCGCTCGGCATTGGCGGCCTGCCAAAAGGC 2051
Query 66746 CGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCG 66805
|| | || ||||||||||| || |||||||| || || | || ||| || | |
Sbjct 2050 CGTATCGTTGAAATCTACGGTCCTGAATCTTCCGGTAAAACCACCCTGACCCTGTCGGTG 1991
Query 66806 GTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTG 66865
| ||| | |||||||| || | || | || | | ||||||| |||||| |||||
Sbjct 1990 ATTGCCCAGGCGCAGAAAATGGGCGCCACCTGTGCGTTCGTCGACGCCGAGCACGCCCTG 1931
Query 66866 GACCCCGAGTACGCCAAGGC--GCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGC 66923
|| || || |||||| ||| ||| || || || | || |||| |||| ||||
Sbjct 1930 GATCCTGAATACGCC--GGCAAGCTGGGCGTCAACGTTGATGACCTGCTGGTTTCCCAGC 1873
Query 66924 CGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGT 66983
||||||| |||||||| |||||||| ||| ||| | || || || || |
Sbjct 1872 CGGACACCGGCGAGCAAGCCCTGGAAATCACCGACATGCTGGTGCGCTCCAACGCCATCG 1813
Query 66984 CCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACA 67043
| | |||| || ||||| ||||| |||||||| || || || |||||||||| |
Sbjct 1812 ACGTGATCGTGGTCGACTCCGTGGCTGCCCTGGTACCCAAGGCTGAAATCGAAGGCGAAA 1753
Query 67044 TCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCA 67103
| || |||| ||||| |||||||| || ||||| ||||| ||||| |||| || |||
Sbjct 1752 TGGGCGACATGCACGTGGGCCTGCAAGCCCGCCTGATGTCCCAGGCGCTGCGTAAAATCA 1693
Query 67104 CTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGA 67163
| || | |||| | | ||||| ||| | ||| |||||||| | || |||||
Sbjct 1692 CCGGTAACATCAAGAACGCCAACTGCCTGGTGATCTTCATCAACCAGATCCGTATGAAGA 1633
Query 67164 TCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCT 67223
||||| || | | ||||| || |||||||| || || || || ||| |||||
Sbjct 1632 TCGGCGTGATGTTCGGCAGCCCG---GAAACCACCACCGGTGGTAACGCGCTGAAGTTCT 1576
Query 67224 ACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTG 67283
|||| || ||||| ||||| |||| || | | | | | ||||||||| || |||| ||
Sbjct 1575 ACGCTTCGGTCCGTCTGGATATCCGCCGTACTGGCGCGGTGAAGGAAGGTGACGAGGTTG 1516
Query 67284 TCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACG 67343
| || | | ||||| || || ||||| |||||||| | |||||||| ||| | |
Sbjct 1515 TTGGTAGCGAAACCCGCGTCAAGGTCGTGAAGAACAAAGTTGCCCCGCCATTCCGTCAGG 1456
Query 67344 CCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGG 67403
| |||||| | | ||||| |||| |||| | | | ||| | |||||||||
Sbjct 1455 CTGAGTTCCAGATTCTCTACGGCAAGGGTATCTACCTGAACGGCGAGATGATCGACCTGG 1396
Query 67404 CCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGT---TCAAGTACGGGGACAAGA 67460
||| ||| || | || ||||||| || ||||||| | | |||| |||||
Sbjct 1395 GCGTACTGCACGGTTTCGTCGAGAAGTCCGGTGCCTGGTATGCCTACAACGGCAGCAAGA 1336
Query 67461 ACGTCGCTCAGGGCAAGCCCAAGGCCGTCCAGTGGCTCAAGGCCAACCCGGACATC 67516
||| |||||||||| |||| | | | ||| || || |||||||| |||
Sbjct 1335 ---TCGGTCAGGGCAAGGCCAACTCGGCCAAGTTCCTGGCGGATAACCCGGATATC 1283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242763496031156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |