Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_005262.3
Length=63882
Score E
Sequences producing significant alignments: (Bits) Value
seq12372 96.9 1e-15
seq6273 91.5 6e-14
>seq12372
Length=38393
Score = 96.9 bits (106), Expect = 1e-15
Identities = 150/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 10147 GCGTAAACAAGGTAATTTTGGTTGGAAACTTAGGGGCCG-ATCCTGAAGTCCGTTACCTG 10205
||||||| || || || ||||||| | ||| || | | | || |||||||||||||||
Sbjct 37996 GCGTAAATAAAGTGATCCTGGTTGGGA-CTTGCGGACAGGACCCCGAAGTCCGTTACCTG 38054
Query 10206 CCGAGCGGCGACGCGGTTGCGAACATCCGTCTCGCGACGACCGATCGATACAAGGACAAG 10265
|| | |||| ||||||| | ||| || | || || || | ||| | | | ||||||
Sbjct 38055 CCAAACGGCAACGCGGTAACTAACCTCAGCCTGGCCACCAGCGAGCAGTGGACCGACAAG 38114
Query 10266 GCGAGCGGCGACATCAAGGAGGCGACTGAATGGCACCGCGTCTCGTTCTTCGGTCGGCTG 10325
| ||| | | ||| || || ||||||||||| ||||| ||||| | ||
Sbjct 38115 CAAACCGGGCAGAAGGTCGAGCGCACCGAGTGGCACCGCGTGTCGTTGTTCGGCAAGGTG 38174
Query 10326 GCTGAGATCGTCGACGAGCACCTGCGCAAGGG 10357
|| ||||||| || |||| |||||||||| ||
Sbjct 38175 GCCGAGATCGCCGGCGAGTACCTGCGCAAAGG 38206
>seq6273
Length=5978
Score = 91.5 bits (100), Expect = 6e-14
Identities = 128/177 (72%), Gaps = 11/177 (6%)
Strand=Plus/Plus
Query 25305 CGCAACCTGATCCTGAAGGCCCGCCAGCTCGGCTTTACGACCCTCATCTGCATCATCTGG 25364
|| |||||||||||||||||||| ||||| ||||| || || |||||||||| |
Sbjct 2841 CGGAACCTGATCCTGAAGGCCCGGCAGCTTGGCTTCACCACTGAGTGCTGCATCATCCAG 2900
Query 25365 CTCGACCACGCGCTGTTCAA---CGCCAACAGCCGGTGCGGCATCATCGCGCAGGATCGG 25421
|||||| ||| |||||| | ||||| ||||| | ||||| || | |
Sbjct 2901 CTCGACGCCGCTCTGTTCGAGTCGGCCAA------GTGCGCACTGATCGCTCACACCCTG 2954
Query 25422 GA-GACGGCCGAGGCGCTGTTTCGGGACAAGGTAAAGTTCGCCTACGACAACCTGCC 25477
| ||| ||| || |||||| ||||| || || |||| ||| ||||||||||||||
Sbjct 2955 AACGAC-GCCAAGCGGCTGTTCCGGGAGAAAGTGAAGTACGCGTACGACAACCTGCC 3010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 204221128407699
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |