Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq17408 114 9e-21
seq26173 105 5e-18
>seq17408
Length=748846
Score = 114 bits (126), Expect = 9e-21
Identities = 116/150 (77%), Gaps = 1/150 (1%)
Strand=Plus/Plus
Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565
|| |||||||| ||||| || ||||||||||||||| ||||| || || | ||||||
Sbjct 535781 GCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCCAGGCCCATG 535840
Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625
|| || ||||||||||| ||||| || || ||||| ||| |||||||||||| ||
Sbjct 535841 TCTCCT-GACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAAAACTGGCA 535899
Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655
| || || ||||||||| || || || ||
Sbjct 535900 AAGGGCGTGGCACGGAGGTAGGGCCATGAG 535929
>seq26173
Length=4939203
Score = 105 bits (116), Expect = 5e-18
Identities = 166/234 (71%), Gaps = 3/234 (1%)
Strand=Plus/Minus
Query 25413 AGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGG 25472
||||| | |||||| | || |||||||||||| | ||| || ||||||| ||||||
Sbjct 2187561 AGCTGCATTTTCAGCAGCTCAGTGTGATCCAGGTAAATGTGTGCATCTCCCAAAGTGTGT 2187502
Query 25473 ACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAG 25532
||| | || || || | || || || | || || |||||||| ||||| || |||
Sbjct 2187501 ACAGAGTCACCTGGCTTCAGGCCTGTGATGTGTGCAATCATGTAGGTGAGCAGGGCATAG 2187442
Query 25533 CTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACA 25592
||||||||||| |||| || || | ||| ||| | || ||| ||||||| ||||| ||
Sbjct 2187441 CTGGCGATGTTGAAGGACACACCCAGGCCCCTGT-CTCCTGACTTCTGGTACAGCTG-CA 2187384
Query 25593 CGAGAGCTCTTCGTCGCTCACGTAAAACTGACACATGGTGTAGCACGGAGGAAG 25646
|| || || | || |||||| || || || | || | |||| | || ||
Sbjct 2187383 GGACAG-TCATGGTTCACCACGTAGAAGTGGCAAAGGGCATGGCACAGGGGCAG 2187331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340010281500549
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |