Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_005856.1
Length=94800
Score E
Sequences producing significant alignments: (Bits) Value
seq6053 192 4e-44
seq6890 163 2e-35
seq15544 147 1e-30
seq12372 107 1e-18
seq7504 102 5e-17
>seq6053
Length=4391
Score = 192 bits (212), Expect = 4e-44
Identities = 506/767 (66%), Gaps = 8/767 (1%)
Strand=Plus/Minus
Query 71865 ACGGGATTTACCGATCTCAATAAGAAGACGGCAGGGCTTCAGCCGTCCGATCTCATCATT 71924
|| || | |||||| || | |||| || || ||||||||| |||| || |||||
Sbjct 1301 ACCGGTTATACCGACCTGGACGAGAAAACCAGCGGCCTTCAGCCGGCCGACCTGATCATC 1242
Query 71925 GTCGCCGCCCGCCCATCTATGGGGAAGACCACGTTTGCGATGAATCTCGTCGAAAATGCC 71984
|| || | ||| || || ||||| || |||||||| || ||||| || || ||||| |||
Sbjct 1241 GTGGCGGGCCGGCCTTCGATGGGCAAAACCACGTTCGCCATGAACCTGGTGGAAAACGCC 1182
Query 71985 GCAGTTCGTAACGATAAGCCCGTATTGGTTTTTAGCCTTGAGATGCCGAGCCACCAGCTG 72044
| | |||| ||| ||| |||| |||| ||| || || ||||| || | ||||
Sbjct 1181 GTGTTGCGTACCGACAAGGCCGTGCTGGTGTTTTCGCTGGAAATGCCAGGCGAATCGCTG 1122
Query 72045 ATGATGCGCTCACTGGCTTCTCTTGCACGCGTTGATCAGACTCGTATTCGGACAGGGCAA 72104
| ||||| ||| | || || | || | || ||||| | || | || |||
Sbjct 1121 GTCATGCGTATGCTGTCCTCACTGGGTCGTATCGACCAGACCAAGGTGCGCTCCGGTCAA 1062
Query 72105 CTTAACGACGAGGATTGGGCGCGGGTTTCTGGCGCAATGGGTATTCTGTTGGACAAGCAG 72164
| | |||||| || ||| | || | | || || | ||| | || | |
Sbjct 1061 TTGAGCGACGACGACTGGCCACGCCTCACGTCGGCGGTG---AACCTGCTAAACGACCGC 1005
Query 72165 AATATTTTTATTGATGACTCAAGCGCCCTGACGCCGACAGAGCTACGTTCCCGCGCTCGT 72224
|| | || || |||||| | || | | | || | ||| | || | ||| | ||
Sbjct 1004 AAGTTGTTCATCGATGACACCGCCGGCATCAGCCCATCGGAGATGCGCGCGCGCACCCGA 945
Query 72225 CGTGTTTATAAAGAAAATGGTGGTTTGAGCATGATTATGATCGACTACCTGCAACTTATG 72284
|| | || | |||| | |||||| ||| |||| |||||||| || |||
Sbjct 944 CGCCTGGCACGCGAGCACGGTGAGATCGCCATGATCATGGTCGATTACCTGCAGCTGATG 885
Query 72285 C-GCGTCCCCGAGCTGCAAG--ATAACCGAACGCTGGAAATTGCCGAGATTTCTCGCTCA 72341
| | ||| | || | | | ||||| ||| || ||| |||| || || || ||
Sbjct 884 CAGATTCCTGGTTCTTCGGGTGACAACCGCACGAACGAGATTTCCGAAATCTCCCGGTCG 825
Query 72342 CTGAAGGCGTTGGCGAAGGAATTACAAGTACC-GGTGGTGGCATTGTCACAACTTAATCG 72400
|| || || |||| |||||||| ||| | || ||| | || | || || || || ||
Sbjct 824 CTCAAAGCCCTGGCCAAGGAATT-CAATTGCCCGGTCATTGCCCTCTCGCAGCTCAACCG 766
Query 72401 ATCGCTTGAACAGCGTGCGGACAAACGACCGGTAAATTCAGATTTACGTGAATCAGGAGC 72460
|| || || ||||| || ||||||| ||||| || || || || |||||||| || ||
Sbjct 765 CTCTCTGGAGCAGCGCCCGAACAAACGCCCGGTGAACTCCGACTTGCGTGAATCCGGTGC 706
Query 72461 AATTGAGCAGGACGCAGACCTGATTATGTTTCTGTATCGCGACGAAGTTTATCACCCGGA 72520
||| ||||||||||| ||| | || ||||| |||| |||||||| || |||||||| ||
Sbjct 705 AATCGAGCAGGACGCCGACGTCATCATGTTCGTGTACCGCGACGAGGTGTATCACCCCGA 646
Query 72521 TAGCGAAATGAAGGGCATTGCCGAGGTAATTATCGGAAAGCAACGAAATGGCCCAATTGG 72580
| ||| || ||| | || || | || ||||| || || || || || ||||||||
Sbjct 645 AACCGAGCACAAAGGCGTGGCGGAAATCATCATCGGCAAACAGCGTAACGGGCCAATTGG 586
Query 72581 CACGGTGAGATTGGCTTTTAACGGCCAATACTCACGGTTTGATAACT 72627
| ||| | |||| || | |||| | ||| | || || || ||||
Sbjct 585 CTTTGTGCGCCTGGCGTTCATCGGCAAGTACACCCGTTTCGAGAACT 539
>seq6890
Length=6377
Score = 163 bits (180), Expect = 2e-35
Identities = 239/336 (71%), Gaps = 3/336 (1%)
Strand=Plus/Plus
Query 72251 GAGCATGATTATGATCGACTACCTGCAACTTATGCGCGTCCCCGAGCTGCAAGATAACCG 72310
|||| |||| |||| || |||||||| || |||||| | | || | || || ||| |
Sbjct 4707 GAGCCTGATCCTGATTGATTACCTGCAGCTCATGCGC-TGCGCGGGT--CAGGAAAACAG 4763
Query 72311 AACGCTGGAAATTGCCGAGATTTCTCGCTCACTGAAGGCGTTGGCGAAGGAATTACAAGT 72370
| | || || || || ||||| | || || || | || |||||| | |
Sbjct 4764 AGCCAACGAGATCAGCGCAATCTCTCGGGCCCTTAAAGCCCTTGCCAAGGAAATGAACTG 4823
Query 72371 ACCGGTGGTGGCATTGTCACAACTTAATCGATCGCTTGAACAGCGTGCGGACAAACGACC 72430
|| ||||| || | || || || || ||||| || || || ||| || |||| || ||
Sbjct 4824 CCCAGTGGTCGCGCTATCGCAGCTCAACCGATCCCTAGAGCAACGTCCGAACAAGCGCCC 4883
Query 72431 GGTAAATTCAGATTTACGTGAATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATGTT 72490
| | || ||||| ||||| ||||| |||||||| || |||||||||||| | || |||||
Sbjct 4884 GATCAACTCAGACTTACGGGAATCCGGAGCAATCGAACAGGACGCAGACGTCATCATGTT 4943
Query 72491 TCTGTATCGCGACGAAGTTTATCACCCGGATAGCGAAATGAAGGGCATTGCCGAGGTAAT 72550
| || |||||||| || ||||||||| | | |||| || |||||||||||| | ||
Sbjct 4944 CGTTTACCGCGACGAGGTGTATCACCCGCAGACCGAATACAAAGGCATTGCCGAGATCAT 5003
Query 72551 TATCGGAAAGCAACGAAATGGCCCAATTGGCACGGT 72586
||||| ||| ||| || ||||| | |||||| ||
Sbjct 5004 CATCGGCAAGGCACGCAACGGCCCTACTGGCACCGT 5039
>seq15544
Length=893
Score = 147 bits (162), Expect = 1e-30
Identities = 404/614 (66%), Gaps = 10/614 (2%)
Strand=Plus/Plus
Query 71874 ACCGATCTCAATAAGAAGACGGCAGGGCTTCAGCCGTCCGATCTCATCATTGTCGCCGCC 71933
||||| ||| | | ||||| || || ||||||||||| | ||||| |||||||
Sbjct 285 ACCGACCTCGACGAAAAGACCAGCGGCCTGCAGCCGTCCGACTTGATCATCGTCGCCGGT 344
Query 71934 CGCCCATCTATGGGGAAGACCACGTTTGCGATGAATCTCGTCGAAAATGCCGCAGTTCGT 71993
|| || || ||||| |||||||| || |||||||| || || ||||| |||| | ||
Sbjct 345 CGTCCGTCCATGGGTAAGACCACCTTCGCGATGAACCTGGTGGAAAACGCCGTGTTACGC 404
Query 71994 AACGATAAGCCCGTATTGGTTTTTAGCCTTGAGATGCCGAGCCACCAGCTGATGATGCGC 72053
| ||| ||| | || |||| | ||| |||||||| || | | |||| |||||
Sbjct 405 AGCGACAAGGCGGTGCTGGTGTACTCCCTCGAGATGCCAGGCGAATCGTTGATCATGCGT 464
Query 72054 TCACTGGCTTCTCTTGCACGCGTTGATCAGACTCGTATTCGGACAGGGCAACTTAACGAC 72113
|| | || |||| || | || ||||| | || | || || ||| | |||
Sbjct 465 ATGCTCTCGTCGCTTGGCCGTATCGACCAGACCAAGGTGCGTTCCGGCCAGCTTGAAGAC 524
Query 72114 GAGGATTGGGCGCGGGTTTCTGGCGCAATGGGTATTCTGTTGGACAAGCAGAATATTTTT 72173
|| || ||| |||| | | ||| || | ||| | || | | || | ||
Sbjct 525 GACGACTGGCCGCGCCTGACCTCCGC---GGTCAACCTGCTCAACGACCGCAAGCTGTTC 581
Query 72174 ATTGATGACTCAAGCGCCCTGACGCCGACAGAGCTACGTTCCCGCGCTCGTCGTGTTTAT 72233
||||||||| | | | | ||| | || | || | || | || || |
Sbjct 582 ATTGATGACACTGCGGGTATCAGCCCGTCCGAAATGCGCGCGCGTACCCGGCGCCTGGTG 641
Query 72234 AAAGAAAATGGTGGTTTGAGCATGATTATGATCGACTACCTGCAACTTATGCGCGTCCCC 72293
|| |||| | | | |||| ||||||||||||||||| | |||| |||||
Sbjct 642 CGTGAGCATGGCGACATCGCCCTGATCATGATCGACTACCTGCAGTTGATGCAGATCCCC 701
Query 72294 GAGCTGCAA----GATAACCGAACGCTGGAAATTGCCGAGATTTCTCGCTCACTGAAGGC 72349
| | | || || ||||| || || ||| | || || ||||| || |||||||
Sbjct 702 G-GTTCCAGTGGCGACAACCGTACCAACGAGATTTCTGAAATCTCTCGTTCCTTGAAGGC 760
Query 72350 GTTGGCGAAGGAATTACAAGTACC-GGTGGTGGCATTGTCACAACTTAATCGATCGCTTG 72408
|||| |||||||| ||| | || ||||||||| ||||| || || || || || || |
Sbjct 761 CCTGGCCAAGGAATT-CAACTGCCCGGTGGTGGCGTTGTCCCAGCTCAACCGTTCCCTGG 819
Query 72409 AACAGCGTGCGGACAAACGACCGGTAAATTCAGATTTACGTGAATCAGGAGCAATTGAGC 72468
|||| ||| | |||| || ||||| || || || || || ||||| ||||| || ||||
Sbjct 820 AACAACGTCCCAACAAGCGTCCGGTGAACTCCGACTTGCGGGAATCCGGAGCGATCGAGC 879
Query 72469 AGGACGCAGACCTG 72482
||||||| ||| ||
Sbjct 880 AGGACGCCGACGTG 893
>seq12372
Length=38393
Score = 107 bits (118), Expect = 1e-18
Identities = 228/340 (67%), Gaps = 3/340 (1%)
Strand=Plus/Plus
Query 21060 CGCGGTGTAAACAAAGTCATCCTGATTGGTACCCTGGGGCAAGACCCGGAGATCAGGTAT 21119
|| || ||||| ||||| |||||| |||| || || || ||||| || || | ||
Sbjct 37992 CGTGGCGTAAATAAAGTGATCCTGGTTGGGACTTGCGGACAGGACCCCGAAGTCCGTTAC 38051
Query 21120 ATACCAAATGGCGGCGCGGTCGGAAGACTCAGCATCGCAACGAATGAATCATGGCGCGAC 21179
| ||||| ||| |||||| | |||||| | || || | || ||| ||||
Sbjct 38052 CTGCCAAACGGCAACGCGGTAACTAACCTCAGCCTGGCCACCAGCGAGCAGTGGACCGAC 38111
Query 21180 AAGCAAACGGGCCAACAGAAAGAGCAAACAGAATGGCATAAAGTCGTTTTGTTCGGAAAA 21239
|||||||| || || || |||| || || ||||| || |||||||| ||
Sbjct 38112 AAGCAAACCGGGCAGAAGGTCGAGCGCACCGAGTGGCACCGCGTGTCGTTGTTCGGCAAG 38171
Query 21240 CTTGCTGAAATTGCGAGTGAGTATTTACGAAAAGGTTCTCAGGTCTACATCGAAGGGAAA 21299
| || || || || | ||||| | || |||||||| || |||||||||||| ||
Sbjct 38172 GTGGCCGAGATCGCCGGCGAGTACCTGCGCAAAGGTTCCCAATGCTACATCGAAGGCAAG 38231
Query 21300 CTTAAAACCCGTAAGTGGACAGATGACGCCGGTGTAGAACGTTACACGACGGAAATTATC 21359
|| ||||||| ||||| || | | ||| | | |||||||| || ||||| ||
Sbjct 38232 CTGCAAACCCGCGAGTGG---GAGAAGGACGGCATCAAGCGTTACACCACTGAAATCATT 38288
Query 21360 GTCAGCCAGGGCGGCACCATGCAAATGATCGGCGCTCGCC 21399
||| | |||||||||||| || | |||| |||||
Sbjct 38289 GTCGACATCAACGGCACCATGCAGTTGCTAGGCGGTCGCC 38328
>seq7504
Length=9783
Score = 102 bits (112), Expect = 5e-17
Identities = 226/337 (67%), Gaps = 9/337 (3%)
Strand=Plus/Plus
Query 21060 CGCGGTGTAAACAAAGTCATCCTGATTGGTACCCTGGGGCAAGACCCGGAGATCAGGTAT 21119
|| || || ||||||||||| ||| | |||||| || || || || || || | ||
Sbjct 2807 CGTGGGGTTAACAAAGTCATTCTGGTCGGTACCTGTGGCCAGGATCCCGAAGTCCGCTAC 2866
Query 21120 ATACCAAATGGCGGCGCGGTCGGAAGACTCAGCATCGCAACGAATGAATCATGGCGCGAC 21179
| || || || || || | || ||| | ||||| | || |||| ||||
Sbjct 2867 CTGCCCAACGGTAATGCCGTGACCAACCTGAGCCTGGCAACCAGCGAGCAATGGACCGAC 2926
Query 21180 AAGCAAACGGGCCAACAGAAAGAGCAAACAGAATGGCATAAAGTCGTTTTGTTCGGAAAA 21239
||||| ||||||| || |||| || |||||||| || ||||||| ||
Sbjct 2927 AAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAATGGCACCGTGTGTCGCTGTTCGGCAAG 2986
Query 21240 CTTGCTGAAATTGCGAGTGAGTATTTACGAAAAGGTTCTCAGGTCTACATCGAAGGGAAA 21299
||||||| ||||| | ||||| | || |||||||| ||| |||||||||||| ||
Sbjct 2987 GTTGCTGAGATTGCCGGCGAGTACCTGCGCAAAGGTTCGCAGTGCTACATCGAAGGCAAG 3046
Query 21300 CTTAAAACCCGTAAGTGGACAGATGACGCCGGTGTAGAACGTTACACGACGGAAATTATC 21359
|| | |||||| ||||| || | | ||| | | || ||||| || ||||| |||
Sbjct 3047 CTGCAGACCCGTGAGTGG---GAAAAAGACGGCATCAAGCGCTACACCACTGAAATCATC 3103
Query 21360 GT---CAGCCAGGGCGGCACCATGCAAATGATCGGCG 21393
|| || | | |||||||||||| || | ||||
Sbjct 3104 GTTGACATCAA---CGGCACCATGCAGCTGCTGGGCG 3137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 303121694610873
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