Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq16393 86.0 3e-12
seq29765 84.2 1e-11
seq13830 82.4 4e-11
seq13810 82.4 4e-11
>seq16393
Length=3353470
Score = 86.0 bits (94), Expect = 3e-12
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513
|||||||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||
Sbjct 1430081 ATTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCA 1430022
Query 11514 ACTGAGCTAATGGGCC 11529
|||||||||| ||||
Sbjct 1430021 ACTGAGCTAACCGGCC 1430006
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 1454323 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 1454382
Query 11528 CC 11529
||
Sbjct 1454383 CC 1454384
>seq29765
Length=860368
Score = 84.2 bits (92), Expect = 1e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 830424 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 830483
Query 11528 CCG 11530
|||
Sbjct 830484 CCG 830486
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 654966 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 654907
Query 11528 CC 11529
||
Sbjct 654906 CC 654905
>seq13830
Length=27862
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 21883 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 21824
Query 11528 CC 11529
||
Sbjct 21823 CC 21822
>seq13810
Length=5449497
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 2358460 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 2358519
Query 11528 CC 11529
||
Sbjct 2358520 CC 2358521
Lambda K H
0.640 0.410 0.922
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261393320003188
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |