Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_006146.1
Length=171096
Score E
Sequences producing significant alignments: (Bits) Value
seq29423 149 7e-31
>seq29423
Length=3049034
Score = 149 bits (164), Expect = 7e-31
Identities = 118/142 (83%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199
|||| |||||||| || || ||| |||| || ||||||||||||||||||||||| || |
Sbjct 2663940 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAGGAGGTGA 2663881
Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259
|||| |||||||| | || | |||| || |||||||||||||||||| ||||| ||||
Sbjct 2663880 TGCCGCAGGCTGAGGACCATGGCCCCAACATCAAAGAGCACGTGAACTCCCTGGGGGAGA 2663821
Query 10260 ATCTAAAGACCCTAAGGCTTCG 10281
| || |||||||| ||||| ||
Sbjct 2663820 AGCTGAAGACCCTCAGGCTGCG 2663799
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418
|||| || || || || |||||||||||||||||||| |||||||| || || ||||| |
Sbjct 2661590 AGCTCCAAGACAAGGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 2661531
Query 10419 TAGAAGCATACATGAC 10434
||||||| ||||||||
Sbjct 2661530 TAGAAGCCTACATGAC 2661515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547169054282880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |