Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq29654 95.1 1e-14 >seq29654 Length=1058 Score = 95.1 bits (104), Expect = 1e-14 Identities = 183/261 (70%), Gaps = 7/261 (3%) Strand=Plus/Plus Query 94158 CCCAGCCGAGCGGGGCGTGGGA-GCCGGGGACCCCGCGCCGCACGGTCAGCGTCGTGTTC 94216 ||||||| | ||| ||||| |||| | ||| ||| |||||||| || || || Sbjct 502 CCCAGCCTTTCTTGGCATGGGATGCCGCGTTGCCC-CGCTCCACGGTCATGGTGGTATTG 560 Query 94217 AGCAGCAGCACCCCGCGGCGCG-CCCAGGCCTCCAGGCAGCCGTGGGCGGGCGCGGGCAG 94275 ||||||| ||| || | || || ||||| | |||| |||| ||| ||| ||| | Sbjct 561 AGCAGCAACACACC-CTGCTCGGCCCAGCTTTGCAGGTAGCCATGGTTGGGGATGGGAAT 619 Query 94276 CGTCGGGTACGTCGCCCGGACCGCCGCGAAGATGTTGGCCAGGCTCGGGGGGATCGGCAC 94335 || | | || || | | | || | ||||||| |||| ||| || ||||||| Sbjct 620 ATTCAGAT-CG-CGAT-GCAGCTCCTTGTAGATGTTCACCAGCGACGGCGGCGTCGGCAC 676 Query 94336 CCCGCGCCGGACGCTGAAGGCCAGCCCGTGGGCCTGGCCCGGCCCGTGGTACGGGTCCTG 94395 || || | || |||| ||| || |||||||| || || ||||||||||||||||| Sbjct 677 GCCAGGCTGCACCGAGAAGCACAGGCCATGGGCCTGCCCTGGGCCGTGGTACGGGTCCTG 736 Query 94396 GCCGATGATGACCACCTTGAC 94416 ||||| ||| ||||||||||| Sbjct 737 GCCGAGGATCACCACCTTGAC 757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458771004433080