Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_006940.2
Length=40793
Score E
Sequences producing significant alignments: (Bits) Value
seq698 655 0.0
>seq698
Length=3433
Score = 655 bits (726), Expect = 0.0
Identities = 776/1044 (74%), Gaps = 8/1044 (1%)
Strand=Plus/Plus
Query 4122 ACGCCAGTTACCAGGAACGCAATTGGCACATGCTTACGGTCGACTACACGGTTCCAGTTG 4181
|| ||||| |||||||| || || || | ||||| || || | || ||||||||||||
Sbjct 191 ACACCAGTAACCAGGAAGGCGATCGGGATGTGCTTGCGCTCCATCACGCGGTTCCAGTTG 250
Query 4182 GCGGCGTTAGCCAGGTCCTGCCAGCTAGCGGAACG-GGCGATAGTCTCGGTGCCGTTGCC 4240
| ||| ||||| ||||||||| || || || |||| | |||||||||||||||||
Sbjct 251 GTGGCCAGCGCCAGATCCTGCCAGGAGGCAGAGCGCGGCG-TGGTCTCGGTGCCGTTGCC 309
Query 4241 GGTGATTACAGCGCTGGTGAAGCTGTAACCAAACGGATGCAGCAACCACGTTTTACGAGT 4300
|||||| || ||| ||||| || | ||| ||||||| ||| || || || |
Sbjct 310 GGTGATGGTGGCCGACAGGAAACTGTAGCCGAGCGGGTGCAGCAGCCAGGTCTTGCGGCT 369
Query 4301 CCACAGGGTTTCAACACCACCACCATTAGCACGAGATGCTTCACGTTCGTATTCCAGCGG 4360
|||||| |||||| || ||||| ||| | |||| ||| || ||||| | ||
Sbjct 370 CCACAGCACTTCAACGCCGCCACCGTTACCGCGAGCCTCTTGGCGCTCGTAGGCGGTTGG 429
Query 4361 CATCTCAGGATTGCCTTCGCCGTAACCGATAGCACCCTGGCCGAAGATGATGGAGATGAA 4420
|||||| |||||| |||||||||||||||||||| || ||||| | | ||||||
Sbjct 430 ATGCTCAGGGGAGCCTTCACCGTAACCGATAGCACCCTGACCAAAGATCACGCTGATGAA 489
Query 4421 TTTACGGCTAGTGTCCTGA-CCAACTACGGTCATGCTGTCATCGACGATGACGCGGTAAC 4479
|| || | || || | || | |||||||| |||||||| | | |||||| |
Sbjct 490 CTTGCG-CGAGCTGCCGGTGCCGATCACGGTCATCTGGTCATCGATCACCAGGCGGTAGC 548
Query 4480 CCTGGTAGGTGGCGAACATGGTGTTGTTCTCAGCATCACGGATGAAGTCGATAAGCTGGG 4539
|||||||||| |||| | ||||||||| ||||| ||||||||||||||||| | |||
Sbjct 549 CCTGGTAGGTCGCGATCTGGGTGTTGTTGTCAGCGTCACGGATGAAGTCGATCATCTGCT 608
Query 4540 CTTTACGGGCCTGT--GCGTATACGAAGCTGTGCATTGCGATAGCACCGAGAACCTCACC 4597
|||| || ||| | || |||||||| |||| || || | ||||| |||| ||
Sbjct 609 TCTTAC--GCATGTCGCCATACACGAAGCTATGCACCGCCATGACGCCGAGCACCTGGCC 666
Query 4598 GCCGTTGCCCATCAATGCATCACCCATAGTCTGGGTAGCATCGATGAATGCACCTGCGTC 4657
||| | |||||||| ||||||||||| |||||||| || |||||||| || || || ||
Sbjct 667 GCCAGTCCCCATCAACGCATCACCCATGGTCTGGGTCGCGTCGATGAAGGCGCCCGCATC 726
Query 4658 GAAGCCTGAAGTTGCAGAAACGTCAACAACCATGTCGTTCTGCTCGTGATACGCATCAGT 4717
||| || || || |||||||| | |||||||||||||| || ||||||||||
Sbjct 727 GAAACCGCCAGCAGCGGAAACGTCGATCACCATGTCGTTCTGGGTATGGAACGCATCAGT 786
Query 4718 AGCGGATACGTTGTCGTTGTACAGGCCGAGTGCAGTTGCAATAAGGCGACGCTGCGCCTG 4777
||| | |||||||||||| | || || | || || | || || ||||| |||||
Sbjct 787 TGCGCCGATGTTGTCGTTGTAGATACCCAGAGAGGTGGCCAACAGCCGGCGCTGAGCCTG 846
Query 4778 ACGCTGCCAGAAGTTATCCAGACGGGATGCGACGGACTGCAACGGATTCTGGCTGGTAAG 4837
|||||||||||||| ||||| || | || ||||| |||| ||| |||| |||||| ||
Sbjct 847 GCGCTGCCAGAAGTTGTCCAGGCGAGCAGCAACGGATTGCAGCGGGTTCTTGCTGGTCAG 906
Query 4838 TTCTACAGTCAGGTCTGCCTGGCCGAAACCTTCGTTCAGATATGCAACGCGGGCCATCAT 4897
|| ||||||||||| |||||||| ||||||||||| || || ||||| ||||||| |||
Sbjct 907 CTCGACAGTCAGGTCGGCCTGGCCAAAACCTTCGTTGAGGTACGCAACACGGGCCAGCAT 966
Query 4898 TTCACCGGTCTGAATAGCGCGCGGGGTCGCGATGTCCTGGTATACGTCATTCGAGTAGTT 4957
|| ||||| | ||| |||||| || | ||| ||| || || |||||||||||
Sbjct 967 ATCGCCGGTTTCAATGTTGCGCGGCTCTGCCACGTCGGCGTACACATCGTTCGAGTAGTT 1026
Query 4958 AGGCTCGATAGAAGTATCGATAGCTTTCCAGAACGGCAGGTTAGCGATGTTAGACGGTCC 5017
||||||| || | ||||| | |||||| |||| | ||| |||||||| ||||| ||
Sbjct 1027 CGGCTCGACGGATGCGTCGATCGACTTCCAGTACGGGATGTTCGCGATGTTCGACGGGCC 1086
Query 5018 GCGGGCAATCTCGGCAGCATACGGAGTTGGGGTCAAAATTCCGGAGTTGAAAAACGCGGT 5077
||| || ||||| ||||| ||||| |||||||| | ||| ||||| | ||| ||||||||
Sbjct 1087 GCGTGCGATCTCAGCAGCGTACGGGGTTGGGGTGAGAATGCCGGACTCGAAGAACGCGGT 1146
Query 5078 TTTCTCTACCGGGTCTTCCGTCATATAGGACGCCAGTACAGGGATATTGCCAGTTACGAT 5137
|| || |||||||||| |||| || || | ||| || ||||| || || || | |||
Sbjct 1147 CTTTTCAACCGGGTCTTGGGTCAGGTACGAGGTCAGCACCGGGATGTTACCGGTGATGAT 1206
Query 5138 GTTACCAATAGTGGTGATTGCCAT 5161
||||| || |||||||| | |||
Sbjct 1207 ATTACCGATCGTGGTGATAGGCAT 1230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130368435084030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |