Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_008194.1
Length=74483
Score E
Sequences producing significant alignments: (Bits) Value
seq1734 311 4e-80
seq8977 291 4e-74
>seq1734
Length=3873
Score = 311 bits (344), Expect = 4e-80
Identities = 563/816 (69%), Gaps = 17/816 (2%)
Strand=Plus/Plus
Query 65398 CATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGG 65457
|||| ||||||||||| | | |||||| ||| ||||| ||||| || || | ||
Sbjct 373 CATTTCCACCGGCTCTCTGGGGCTGGACATCGCGCTGGGTATCGGCGGTCTGCCAAAAGG 432
Query 65458 CCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTATGTCTCCACGC 65517
||| | || |||||||||||||| ||||| ||||| || | || || ||| |
Sbjct 433 CCGTATCGTCGAAATCTACGGCCCGGAATCGTCAGGTAAAACCACGCTCACGCTCTCGGT 492
Query 65518 GGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCT 65577
| ||| | || ||||| || | || | || | | |||| || ||||| | ||
Sbjct 493 CATCGCCGAAGCCCAGAAAAGTGGCGCCACCTGTGCGTTCGTCGATGCCGAGCATGCTCT 552
Query 65578 GGACCCTGAGTACGCCAAGGCG--CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAG 65635
|| || |||||||| ||| || || || || | ||| |||| |||| |||
Sbjct 553 TGATCCGGAGTACGCT--GGCAAACTGGGCGTCAACGTAGACGACCTGCTGGTTTCGCAG 610
Query 65636 CCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGA-GCT 65694
|| ||||| || |||||||| ||||| || ||| | | || ||| | | ||
Sbjct 611 CCTGACACGGGTGAGCAGGCGCTGGAAATTACCGACATGTTGGTACGGTC---CAATGCG 667
Query 65695 GTCCA--TCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGC 65752
||| | || || |||| ||||| |||||||| ||||| || || || ||||||||
Sbjct 668 GTCGACGTCATCATCGTCGACTCCGTGGCGGCGCTGGTACCCAAGGCTGAAATCGAAGGC 727
Query 65753 GACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAG 65812
|| || || |||| ||||| ||| |||| || || || ||||| ||||| ||||||||
Sbjct 728 GAAATGGGTGACATGCACGTGGGCTTGCAGGCTCGTCTGATGTCCCAGGCGCTGCGCAAG 787
Query 65813 CTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAG 65872
|||| || | |||| | | ||||| ||| ||| |||||||| | || |
Sbjct 788 ATCACCGGTAACATCAAGAACGCCAACTGCCTGGTTATCTTCATCAACCAGATCCGTATG 847
Query 65873 AAGATCGGCA--ACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGA 65930
||||||||| | || | || ||||| || |||||||| |||||||| || |||
Sbjct 848 AAGATCGGCGTGATGTTCGGTA--GCCCG---GAAACCACCACCGGCGGCAACGCACTGA 902
Query 65931 GGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATG 65990
|||||| ||||| || ||| |||| |||| |||| || | | ||||||||||| |
Sbjct 903 AGTTCTATGCCTCGGTTCGCCTGGACATCCGCCGCACCGGTGCAGTCAAGGAAGGCGACG 962
Query 65991 AGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACC 66050
||| || || | ||||| || ||| |||||||||||||| |||| || ||| ||
Sbjct 963 AGGTGGTGGGTAGTGAAACCCGCGTCAAGATCGTCAAGAACAAGGTGGCGCCACCGTTCC 1022
Query 66051 GCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCG 66110
| | || || ||| | ||||||| |||| |||| ||| | | ||| || |||
Sbjct 1023 GTCAAGCGGAATTCCAGATTCTGTACGGCAAGGGTATCTACCGTAACGGTGAAATCATCG 1082
Query 66111 ACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACA 66170
| |||| |||||| ||||||||||| |||| ||||||||||||| || ||| | ||
Sbjct 1083 ATCTGGGCGTGTCTCAGGGCCTGGTCGAGAAATCGGGCGCCTGGTACAGCTACCAAGGCA 1142
Query 66171 AGAACGTCGCTCAGGGCAAGCCCAAGGCCGTCCAGT 66206
| || ||| |||||||||| | || || | | |||
Sbjct 1143 ACAAGATCGGTCAGGGCAAGGCGAATGCTGCCAAGT 1178
>seq8977
Length=2429
Score = 291 bits (322), Expect = 4e-74
Identities = 572/839 (68%), Gaps = 19/839 (2%)
Strand=Plus/Minus
Query 65399 ATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGC 65458
||| |||| |||||| | | ||||||| ||| || ||||| || || || | |||
Sbjct 2110 ATTTCCACTGGCTCTCTGGGTCTGGACATCGCGCTCGGCATTGGCGGCCTGCCAAAAGGC 2051
Query 65459 CGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTATGTCTCCACGCG 65518
|| | || ||||||||||| || |||||||| || || | || || | | || ||
Sbjct 2050 CGTATCGTTGAAATCTACGGTCCTGAATCTTCCGGTAAAACCACCCT--GAC-CCTGTCG 1994
Query 65519 GTG---GCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCC 65575
||| ||| | |||||||| || | || | || | | ||||||| |||||| ||
Sbjct 1993 GTGATTGCCCAGGCGCAGAAAATGGGCGCCACCTGTGCGTTCGTCGACGCCGAGCACGCC 1934
Query 65576 CTGGACCCTGAGTACGCCAAGGC--GCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTC 65633
||||| ||||| |||||| ||| ||| || || || | || |||| |||| |
Sbjct 1933 CTGGATCCTGAATACGCC--GGCAAGCTGGGCGTCAACGTTGATGACCTGCTGGTTTCCC 1876
Query 65634 AGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGC 65693
|||||||||| |||||||| |||||||| ||| ||| | || || || ||
Sbjct 1875 AGCCGGACACCGGCGAGCAAGCCCTGGAAATCACCGACATGCTGGTGCGCTCCAACGCCA 1816
Query 65694 TGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCG 65753
| | | |||| || ||||| ||||| |||||||| || || || |||||||||
Sbjct 1815 TCGACGTGATCGTGGTCGACTCCGTGGCTGCCCTGGTACCCAAGGCTGAAATCGAAGGCG 1756
Query 65754 ACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGC 65813
| || || |||| ||||| |||||||| || ||||| ||||| ||||| |||| ||
Sbjct 1755 AAATGGGCGACATGCACGTGGGCCTGCAAGCCCGCCTGATGTCCCAGGCGCTGCGTAAAA 1696
Query 65814 TCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGA 65873
|||| || | |||| | | ||||| ||| | ||| |||||||| | || ||
Sbjct 1695 TCACCGGTAACATCAAGAACGCCAACTGCCTGGTGATCTTCATCAACCAGATCCGTATGA 1636
Query 65874 AGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGT 65933
|||||||| || | | ||||| || |||||||| || || || || ||| ||
Sbjct 1635 AGATCGGCGTGATGTTCGGCAGCCCG---GAAACCACCACCGGTGGTAACGCGCTGAAGT 1579
Query 65934 TCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGG 65993
||||||| || ||||| ||||| |||| || | | | | | ||||||||| || ||||
Sbjct 1578 TCTACGCTTCGGTCCGTCTGGATATCCGCCGTACTGGCGCGGTGAAGGAAGGTGACGAGG 1519
Query 65994 CTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCA 66053
||| || | | ||||| || |||||||| |||||||| | |||||||| |||
Sbjct 1518 TTGTTGGTAGCGAAACCCGCGTCAAGGTCGTGAAGAACAAAGTTGCCCCGCCATTCCGTC 1459
Query 66054 ACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACC 66113
| || |||||| | | ||||| |||| |||| | | | ||| | ||||||
Sbjct 1458 AGGCTGAGTTCCAGATTCTCTACGGCAAGGGTATCTACCTGAACGGCGAGATGATCGACC 1399
Query 66114 TGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGT---TCAAGTACGGGGACA 66170
||| ||| ||| || | || ||||||| || ||||||| | | |||| ||
Sbjct 1398 TGGGCGTACTGCACGGTTTCGTCGAGAAGTCCGGTGCCTGGTATGCCTACAACGGCAGCA 1339
Query 66171 AGAACGTCGCTCAGGGCAAGCCCAAGGCCGTCCAGTGGCTCAAGGCCAACCCGGACATC 66229
||| ||| |||||||||| |||| | | | ||| || || |||||||| |||
Sbjct 1338 AGA---TCGGTCAGGGCAAGGCCAACTCGGCCAAGTTCCTGGCGGATAACCCGGATATC 1283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 238131630455692
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |