Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq4839 118 9e-22
seq5365 87.8 2e-12
>seq4839
Length=4080137
Score = 118 bits (130), Expect = 9e-22
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| |||||||||| ||||||| | || |||||| | |
Sbjct 528734 ATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 528793
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| |||||| ||||| || ||| ||||| || || || || ||||||||
Sbjct 528794 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 528853
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | ||||||||||| ||||| | ||||||| |||||| | ||||||||
Sbjct 528854 CAGAGGCTGATTTTTGCCGGGAAACAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 528913
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || ||||| || || || ||
Sbjct 528914 ATCCAGAAAGAGTCGACCCTGCA 528936
Score = 118 bits (130), Expect = 9e-22
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| |||||||||| ||||||| | || |||||| | |
Sbjct 529646 ATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 529705
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| |||||| ||||| || ||| ||||| || || || || ||||||||
Sbjct 529706 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 529765
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || |||||||| ||||| | ||||||| ||||| || || |||||
Sbjct 529766 CAGAGGCTCATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 529825
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || ||||||||||| || ||
Sbjct 529826 ATCCAGAAAGAATCCACTCTGCA 529848
>seq5365
Length=1496801
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/215 (70%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| |||| || || ||||||| | || | ||| | |
Sbjct 702032 ATGCAGATCTTTGTGAAGACCTTGATGGGCAAGACCATCACTCTAGAGATCGAGCCCAGT 701973
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| | ||| | || |||| |||| || ||||| || || | ||||||||||
Sbjct 701972 GACACCACTGAG--AATGTCAAAGCTAAAATCCAA-GACAAGGAGGGCAGTCCACCTGAC 701916
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| ||||| | ||||| | |||||||| | | |||| |||||| || || ||
Sbjct 701915 CAGCAGCGTCTGATTTTCACGGGCAAACAGCTGAAGGATGGCCGCACTCTGTCAGACTAT 701856
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| || |||| ||||| || || || |||||
Sbjct 701855 AATATCCAGGAAGAGTCCACTCTGCACTTGGTGCT 701821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433165798965095
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |