Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq11056 104 2e-17
seq451 104 2e-17
seq2328 102 7e-17
seq14188 96.9 3e-15
seq20241 95.1 1e-14
seq9861 89.7 4e-13
seq4839 89.7 4e-13
>seq11056
Length=1110308
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| ||||| |||||||| || ||| | || || || |||||||||||||| || |
Sbjct 356876 CCACCACGAAGTCTCAACACAGGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 356817
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| |||||| |||||| |||| || ||||| |||| || | || ||||| ||||||
Sbjct 356816 AGAGTACGTCCATCTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGA 356757
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|| ||||| ||||| ||||| ||| | ||| | || || | || || |||
Sbjct 356756 ATTCCTTCCTTGTCCTGGATCTTGGCCATTACATTTTCTATTGTATCCGAGGGTTTGACC 356697
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || | || || || ||||| || || || |||||||||||
Sbjct 356696 TCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 356650
>seq451
Length=5792110
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| ||||| |||||||| || | ||| | || || || |||||| |||||| || |
Sbjct 1082993 CCACCACGAAGTCTCAACACAAGATGAAGGGTGGACTCCTTTTGAGTGTTGTGGTCAGAC 1082934
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| |||||| |||||| |||| || ||||| |||| | | || ||||| ||||||
Sbjct 1082933 AGAGTACGTCCATCTTCCCGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGGTCAGGAGGA 1082874
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|| ||||| ||||| ||||| |||| | ||| | | || | || ||||||
Sbjct 1082873 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTTTCTATCATATCCGAGGGTTCGACC 1082814
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || || || || || ||||| || || || |||||||||||
Sbjct 1082813 TCGAGAGTGACGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 1082767
>seq2328
Length=1860655
Score = 102 bits (112), Expect = 7e-17
Identities = 160/228 (70%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| |||||||| || | ||| | || || || |||||| ||||||| ||
Sbjct 1240009 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCAGA 1240068
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| |||||| |||||| || || || ||||| |||| || | || ||||| |||||
Sbjct 1240069 CAAAGTACGTCCATCTTCCAGGTGCTTGCCAGCAAAGATCAGTCT-TGCTGGTCAGGAGG 1240127
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| |||| ||||| ||||| |||| | ||| || || | || ||||||
Sbjct 1240128 AATTACTTCCTTGTCCTGGATCTTGGCCTTTACGTTTTCTGTTGTATCTGAGGGTTCGAC 1240187
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || | || || || ||||| || || || |||||||||||
Sbjct 1240188 CTCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 1240235
>seq14188
Length=5250308
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| |||||||| || | | | | | || || |||||| |||||| ||
Sbjct 4004073 ACCACCACGAAGTCTCAACACAAGACGAAGGGCGGACTCCTTTTGAGTGTTGTGGTCAGA 4004132
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| |||||| |||||| |||| || ||||| |||| || | || ||||| |||||
Sbjct 4004133 CAGAGTACGTCCATCTTCCAGTTACTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGG 4004192
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| ||||| ||||| ||||| || | | ||| | || || | || ||||||
Sbjct 4004193 AATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCTATTGTATCCGAGGGTTCGAC 4004252
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || | || || || ||||| || || || |||||||||||
Sbjct 4004253 CTCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 4004300
>seq20241
Length=2711202
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || ||||||||||| | ||| || |||||| || ||||| ||
Sbjct 1753158 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 1753217
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||| | ||| ||||| || || |||||||| || || ||||| ||
Sbjct 1753218 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 1753277
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| ||| || || |||| ||| | || ||||||||||| ||
Sbjct 1753278 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 1753337
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 1753338 TTCACGAAGATCTGCAT 1753354
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || ||||||||||| | ||| || |||||| || ||||| ||
Sbjct 1753386 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 1753445
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||| | ||| ||||| || || |||||||| || || ||||| ||
Sbjct 1753446 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 1753505
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| ||| || || |||| ||| | || ||||||||||| ||
Sbjct 1753506 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 1753565
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 1753566 TTCACGAAGATCTGCAT 1753582
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || ||||||||||| | ||| || |||||| || ||||| ||
Sbjct 1753614 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 1753673
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||| | ||| ||||| || || |||||||| || || ||||| ||
Sbjct 1753674 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 1753733
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| ||| || || |||| ||| | || ||||||||||| ||
Sbjct 1753734 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 1753793
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 1753794 TTCACGAAGATCTGCAT 1753810
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || ||||||||||| | ||| || |||||| || ||||| ||
Sbjct 1753842 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 1753901
Query 114246 GCGTAGATGAGACGCTGTTGGTC--CGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTT 114303
|| ||||||| | ||| ||||| || || ||||||||| | || ||||| |
Sbjct 1753902 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGGGATGCCTTCTATCCTGG--ATCTTGGCCT 1753959
Query 114304 TTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAG 114363
| | | || | |||||| ||| || || |||| ||| | || || |||||||| |
Sbjct 1753960 TCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGG 1754019
Query 114364 TTTTTACAAAAATCTGCAT 114382
| || || |||||||||||
Sbjct 1754020 TCTTCACGAAAATCTGCAT 1754038
>seq9861
Length=3422124
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213
|||| |||| |||||||| | | ||| | ||||| || ||||||||||||| ||
Sbjct 2119804 TACCAGCACGAAGTCTCAACAAAAGATGAAGAGTAGACTCCTTTTGAATGTTGTGGTCAG 2119745
Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273
|| | |||| |||||| |||| || ||||| || | || || || ||||| | ||
Sbjct 2119744 ACAAAATACGTCCATCTTCCCGTTGCTTGCCAGCAAAGGTCAGTCGTTGCTGGTCAGAAG 2119685
Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333
|||| |||| || || ||||| |||| | ||| | || || | || |||||
Sbjct 2119684 GAATTACTTCCTTATCTTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCGA 2119625
Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
| || | || | || || || ||| | | || ||||||||||||||
Sbjct 2119624 CCTCGAGAGTGATGGTCTTCCCTGTCCGGATCTTCACAAAAATCTGCAT 2119576
>seq4839
Length=4080137
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || ||||||||||| | ||| || |||||| || ||||| ||
Sbjct 529386 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGTTTCCCG 529327
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||| | ||| ||||| || || ||||| || ||||| ||||| ||
Sbjct 529326 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 529267
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| ||| || || |||| ||| | || || |||||||| ||
Sbjct 529266 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTC 529207
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 529206 TTCACGAAGATCTGCAT 529190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419977137523356
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |