Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq20687 87.8 3e-12
seq15277 84.2 4e-11
>seq20687
Length=1308170
Score = 87.8 bits (96), Expect = 3e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 245011 CATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGA 245070
||||||||| || || ||||| ||||| |||||||||||||| | |||||| |||
Sbjct 989751 CATGAAGAGATCCGGAATCCAAAGGGCAAAGAAGAGGTCCCTGGCACGCTGCTCTTCCTT 989692
Query 245071 GCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTA 245130
|| ||||||||| | | || | || ||||||| ||| | ||||| ||||||| |||
Sbjct 989691 TCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGCTCCAGGTA 989632
Query 245131 GACAGCGAGGGCGCCGGGCCGCT 245153
| || | || || || ||||
Sbjct 989631 AATGGCAAATGCCCCAGGTCGCT 989609
>seq15277
Length=4737824
Score = 84.2 bits (92), Expect = 4e-11
Identities = 95/125 (76%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767
||||||||| |||| || || || |||||||| || || | || || || || ||||||
Sbjct 3367543 GTAGCCTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGG 3367484
Query 42768 CTC-AAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826
||| || | ||| | ||||||||| ||||| || || || ||||| || ||||| ||
Sbjct 3367483 CTCAAAAAACGAGGACT-GATGCCCGGCCTCACATTTTCCAATGAACTTATTAGCAGAGA 3367425
Query 42827 CGAGG 42831
|||||
Sbjct 3367424 CGAGG 3367420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 943976656376880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |