Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_009232.2 Length=42572 Score E Sequences producing significant alignments: (Bits) Value seq698 663 0.0 >seq698 Length=3433 Score = 663 bits (734), Expect = 0.0 Identities = 773/1041 (74%), Gaps = 2/1041 (0%) Strand=Plus/Minus Query 7254 ATGGCAATTACCACTATTGGCGATATCGTAACCGGCAACATCCCTGTACTGGCGTCTTAT 7313 ||| | || ||||| || || ||||| | ||||| |||||||| || ||| | || || Sbjct 1230 ATGCCTATCACCACGATCGGTAATATCATCACCGGTAACATCCCGGTGCTGACCTCGTAC 1171 Query 7314 ATGACCGAAGACCCGGTAGAGAAAACCGCGTTTTTTGACTCCGGTATCCTCACCTCTACC 7373 ||||| |||||||||| || || |||||||| || || ||||| || |||||| | ||| Sbjct 1170 CTGACCCAAGACCCGGTTGAAAAGACCGCGTTCTTCGAGTCCGGCATTCTCACCCCAACC 1111 Query 7374 CCGTATGCGGCTGAGATTGCTAACGGTCCGTCAAACATTGCTAACCTGCCGTTCTGGAAA 7433 ||||| || |||||||| || ||| ||||| ||||| || ||| | |||| |||||| Sbjct 1110 CCGTACGCTGCTGAGATCGCACGCGGCCCGTCGAACATCGCGAACATCCCGTACTGGAAG 1051 Query 7434 GCTATCGATACCTCTATCGAACCTAACTATTCGAACGATGTGTATCAGGATATCGCTACT 7493 | ||||| | || |||| || ||||| |||||||||||||| || | || Sbjct 1050 TCGATCGACGCATCCGTCGAGCCGAACTACTCGAACGATGTGTACGCCGACGTGGCAGAG 991 Query 7494 CCGCGCGCTATTCAGACTGGTGAAATGATGGCCCGTGTTGCCTACCTGAACGAAGGCTTT 7553 |||||| ||| | || || || ||| ||||||||||||| ||||| |||||||| ||| Sbjct 990 CCGCGCAACATTGAAACCGGCGATATGCTGGCCCGTGTTGCGTACCTCAACGAAGGTTTT 931 Query 7554 GGTCAGGCGGACCTTACCGTCGAATTGACCAGCCAGAATCCGTTGCAGTCCGTAGCGTCT 7613 || ||||| ||||| || ||||| |||||||| |||| ||| |||| ||||| || || Sbjct 930 GGCCAGGCCGACCTGACTGTCGAGCTGACCAGCAAGAACCCGCTGCAATCCGTTGCTGCT 871 Query 7614 CGTCTGGATAACTTCTGGCAGCGTCAGGCGCAGCGTCGTCTTATCGCAACTGCCCTCGGT 7673 || ||||| |||||||||||||| ||||| ||||| || || | || || | || ||| Sbjct 870 CGCCTGGACAACTTCTGGCAGCGCCAGGCTCAGCGCCGGCTGTTGGCCACCTCTCTGGGT 811 Query 7674 CTGTACAACGACAACGTGTCCGCTACTGATGCGTATCACGAGCAGAACGACATGGTGGTG 7733 | |||||||||||| | ||| |||||||||| || ||||||||||||||| | Sbjct 810 ATCTACAACGACAACATCGGCGCAACTGATGCGTTCCATACCCAGAACGACATGGTGATC 751 Query 7734 GACGTTTCCGCTACCCTGGGTTTCGACGCAGGCGCATTTATTGATGCTACCCAGACTATG 7793 |||||||||||| | |||||||| || ||||| || || || || |||||||| ||| Sbjct 750 GACGTTTCCGCTGCTGGCGGTTTCGATGCGGGCGCCTTCATCGACGCGACCCAGACCATG 691 Query 7794 GGCGACGCATTGATGGGCAACGGTGGTGAGGTTCTCGGTGCTATTGCAATGCACAGCTTC 7853 || || || |||||||| | || || |||| ||||| | || || |||| |||||| Sbjct 690 GGTGATGCGTTGATGGGGACTGGCGGCCAGGTGCTCGGCGTCATGGCGGTGCATAGCTTC 631 Query 7854 GTATATGCTCAGGCCCGTAAAGCCCAGCTTATCGACTTCATCCGTGATGCTGAGAACAAC 7913 || |||| | ||||| ||| | ||||||||||||||||| ||||| |||||| Sbjct 630 GTGTATGGCGACATGCGTAAGAAGCAGATGATCGACTTCATCCGTGACGCTGACAACAAC 571 Query 7914 ACCATGTTTGCTACCTACCAGGGCTATCGCGTCATCGTTGATGACAGCATGACCGTAGTA 7973 ||| | | || |||||||||||||| ||| | | | |||||| |||||||| | Sbjct 570 ACCCAGATCGCGACCTACCAGGGCTACCGCCTGGTGATCGATGACCAGATGACCGTGATC 511 Query 7974 GGC-CAGGGTGCGCAGCGCAAGTTCATCTCCATCATCTTTGGCCAGGGCGCAATCGGCTA 8032 ||| | || || | ||||||||||||| | | |||||||| ||||| || ||||| || Sbjct 510 GGCACCGGCAGCTC-GCGCAAGTTCATCAGCGTGATCTTTGGTCAGGGTGCTATCGGTTA 452 Query 8033 CGGCGAAGGAAACCCCGTGATGCCGTTGGAATACGAGCGTGAAGCATCTCGCGCTAACGG 8092 ||| ||||| ||| | | || | |||||||| ||| |||||| |||||| Sbjct 451 CGGTGAAGGCTCCCCTGAGCATCCAACCGCCTACGAGCGCCAAGAGGCTCGCGGTAACGG 392 Query 8093 CGGTGGTGTAGAAACGCTGTGGACTCGTAAGACCTGGTTGCTGCACCCGTTCGGTTACCG 8152 || || || ||| |||||||| || ||||||||| ||||||||||| |||| ||| | Sbjct 391 TGGCGGCGTTGAAGTGCTGTGGAGCCGCAAGACCTGGCTGCTGCACCCGCTCGGCTACAG 332 Query 8153 TTTCACCAGCGCCGTAATCACCGGCAACGGCACCGAGACTATTGCCCGCTCCGCTAGCTG 8212 |||| ||| ||||||||||||||||||||||| | | ||||| || ||| Sbjct 331 TTTCCTGTCGGCCACCATCACCGGCAACGGCACCGAGACCACGCCGCGCTCTGCCTCCTG 272 Query 8213 GCAAGACCTGGCTAACGCCACTAACTGGAACCGTGTAGTCGACCGTAAGCATGTGCCAAT 8272 ||| || ||||| ||||| ||||||||||| || | || || ||||| | || || Sbjct 271 GCAGGATCTGGCGCTGGCCACCAACTGGAACCGCGTGATGGAGCGCAAGCACATCCCGAT 212 Query 8273 TGCGTTCCTGGTAACTGGCGT 8293 || |||||||| ||||| || Sbjct 211 CGCCTTCCTGGTTACTGGTGT 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136059158823804