Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq17408 98.7 9e-16
seq26173 96.9 3e-15
>seq17408
Length=748846
Score = 98.7 bits (108), Expect = 9e-16
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308
|| || | ||| || || | |||| |||||||| ||||| || || || |||| |||
Sbjct 535778 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCCAGGCCC 535837
Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368
|||||||| |||||||| |||||||| ||||| |||||||||| | || ||||| ||
Sbjct 535838 ATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAAAACTGG 535897
Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCAT 20397
|| | ||| || || || || |||||
Sbjct 535898 CAAAGGGCGTGGCACGGAGGTAGGGCCAT 535926
>seq26173
Length=4939203
Score = 96.9 bits (106), Expect = 3e-15
Identities = 114/153 (75%), Gaps = 1/153 (1%)
Strand=Plus/Minus
Query 20191 GTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATG 20250
||| ||||| ||||||||||| ||||| | | | || || || | || || || | ||
Sbjct 2187529 GTAAATGTGTGCATCTCCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCTGTGATGTG 2187470
Query 20251 AGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCAT 20310
|||| ||| || || | |||| ||||||||| ||||| || | || |||| ||| |
Sbjct 2187469 TGCAATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGACACACCCAGGCCCCT 2187410
Query 20311 GTCTCCCGACCTCTGATACAGCTGACAGGAAAG 20343
|||||| ||| |||| |||||||| ||||| ||
Sbjct 2187409 GTCTCCTGACTTCTGGTACAGCTG-CAGGACAG 2187378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441203351464920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |