Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq18312 113 5e-20 >seq18312 Length=6437 Score = 113 bits (124), Expect = 5e-20 Identities = 282/418 (67%), Gaps = 14/418 (3%) Strand=Plus/Plus Query 10741 AATCTTCTCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTACGATCAAAGCGACC 10800 ||||| ||| ||||| || | || ||| ||| || || ||| || |||||||| Sbjct 1097 AATCTGCTCACGACCCCGAATGTCCGGCAGGCCAACGACGACCTGACGGTCGAAGCGACC 1156 Query 10801 TGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGAT 10860 ||||| || || || ||| |||| ||| |||||| ||||| |||||||| | ||| Sbjct 1157 GGGGCGCAGCAGCGCAGGGTCGAGGACGTCAGGGCGGTTGGTCGCGGCGATGACGATGAT 1216 Query 10861 GCC--CGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCG 10918 ||| ||| || | || ||||| |||||||| || | || |||| ||| || || Sbjct 1217 GCCATCGT-TCATC-TCGAAGCCGTCCATCTCTACCAGCAACTGGTTGAGGGTCTGCTCA 1274 Query 10919 CGTTCATCATT---CGCGGGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATT 10975 || || || | | || ||| ||| |||| || || ||||||||||| || Sbjct 1275 CGCTCGTCGTGGCCCCCGCCCATGCCA---GCACCACGGTGACGGCCGACGGCGTCGATC 1331 Query 10976 TCATCGATGAAAACGATACACGGTTGATT-TTCACGGGCAACTTCAAAGATATCTCGGAC 11034 || |||||||| | ||| || || | ||| || | || | || || || || || Sbjct 1332 TCGTCGATGAAGATGATGCAAGGGGCGTGCTTCTTGGCCTGCT-CGAACATGTCGCGTAC 1390 Query 11035 TCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCGGAACATTG-GATGA 11093 | ||||||||||||| || |||||||| || || | | ||||| || | || || Sbjct 1391 ACGGCTGGCACCGACACCGACGAACATTTCAACGAAGTCCGACCCGGAA-ATGGTGAAGA 1449 Query 11094 AGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGG 11151 | || || |||| || || || || || ||| || |||||||| || || || || Sbjct 1450 ACGGCACCTTGGCCTCGCCTGCAATAGCCTTGGCCAGCAGGGTCTTACCGGTACCGGG 1507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597124268486040