Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_011056.1
Length=75811
Score E
Sequences producing significant alignments: (Bits) Value
seq8977 273 1e-68
seq1734 248 4e-61
>seq8977
Length=2429
Score = 273 bits (302), Expect = 1e-68
Identities = 563/837 (67%), Gaps = 3/837 (0%)
Strand=Plus/Minus
Query 65913 ATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGC 65972
||| |||| ||||| | | ||||||| ||| |||||||| || || || | |||
Sbjct 2110 ATTTCCACTGGCTCTCTGGGTCTGGACATCGCGCTCGGCATTGGCGGCCTGCCAAAAGGC 2051
Query 65973 CGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCG 66032
|| | || || |||||||||||||| ||||| || || | || || ||| | |
Sbjct 2050 CGTATCGTTGAAATCTACGGTCCTGAATCTTCCGGTAAAACCACCCTGACCCTGTCGGTG 1991
Query 66033 GTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTC 66092
| ||| | || ||||| || | || | || | | |||||||||| || | ||
Sbjct 1990 ATTGCCCAGGCGCAGAAAATGGGCGCCACCTGTGCGTTCGTCGACGCCGAGCACGCCCTG 1931
Query 66093 GACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCA 66152
|| ||||| ||||||| ||| || || | || || | || ||||| |||||
Sbjct 1930 GATCCTGAATACGCCGGCAAGCTGGGCGTCAACGTTGATGACCTGCTGGTTTCCCAGCCG 1871
Query 66153 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCC 66212
||||| |||||||| |||||||| ||| ||| | || || || || | |
Sbjct 1870 GACACCGGCGAGCAAGCCCTGGAAATCACCGACATGCTGGTGCGCTCCAACGCCATCGAC 1811
Query 66213 ATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATC 66272
| ||||| || ||||| ||||| |||||||| || ||| || ||||||| || ||
Sbjct 1810 GTGATCGTGGTCGACTCCGTGGCTGCCCTGGTACCCAAGGCTGAAATCGAAGGCGAAATG 1751
Query 66273 GGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACC 66332
|| ||| |||||| |||||||| |||||||||||||| ||||| |||| || | |||
Sbjct 1750 GGCGACATGCACGTGGGCCTGCAAGCCCGCCTGATGTCCCAGGCGCTGCGTAAAATCACC 1691
Query 66333 GGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATC 66392
|| | || | | ||||| || | | | || ||| | || |||||||
Sbjct 1690 GGTAACATCAAGAACGCCAACTGCCTGGTGATCTTCATCAACCAGATCCGTATGAAGATC 1631
Query 66393 GGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTAC 66452
||| || | | ||||| || ||||||||||||||||| || ||| ||||||
Sbjct 1630 GGCGTGATGTTCGGCAGCCCG---GAAACCACCACCGGTGGTAACGCGCTGAAGTTCTAC 1574
Query 66453 GCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTC 66512
|| ||||| ||| ||||| ||||| | | | | | | ||||||||| || |||| |||
Sbjct 1573 GCTTCGGTCCGTCTGGATATCCGCCGTACTGGCGCGGTGAAGGAAGGTGACGAGGTTGTT 1514
Query 66513 GGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCT 66572
|| | | || ||||| ||||| || |||||||| | || || || ||| ||||||
Sbjct 1513 GGTAGCGAAACCCGCGTCAAGGTCGTGAAGAACAAAGTTGCCCCGCCATTCCGTCAGGCT 1454
Query 66573 GAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGGCTGAACTCCTCGACATGGCC 66632
||||| || |||||||| |||| || | || | | || | ||||| ||| |
Sbjct 1453 GAGTTCCAGATTCTCTACGGCAAGGGTATCTACCTGAACGGCGAGATGATCGACCTGGGC 1394
Query 66633 GTTTCCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAGAACATC 66692
|| | || || || ||||||| || ||||||| ||| | || || |||
Sbjct 1393 GTACTGCACGGTTTCGTCGAGAAGTCCGGTGCCTGGTATGCCTACAACGGCAGCAAGATC 1334
Query 66693 GGCCAGGGCAAGCCCAAGACCGTGCAGTGGCTGAAGGACAACCCGGACGTCGCCGCC 66749
|| ||||||||| |||| | | ||| ||| ||| |||||||| |||| |||
Sbjct 1333 GGTCAGGGCAAGGCCAACTCGGCCAAGTTCCTGGCGGATAACCCGGATATCGCTGCC 1277
>seq1734
Length=3873
Score = 248 bits (274), Expect = 4e-61
Identities = 534/796 (67%), Gaps = 7/796 (1%)
Strand=Plus/Plus
Query 65911 CCATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGG 65970
||||| |||||||||| | | |||||| ||| || || ||||| || || | |
Sbjct 372 CCATTTCCACCGGCTCTCTGGGGCTGGACATCGCGCTGGGTATCGGCGGTCTGCCAAAAG 431
Query 65971 GCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACG 66030
|||| | || || |||||||| || || || ||||| || | ||| | ||| |
Sbjct 432 GCCGTATCGTCGAAATCTACGGCCCGGAATCGTCAGGTAAAACCACGCTCACGCTCTCGG 491
Query 66031 CGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTC 66090
| ||| | |||||||| || | || | || | | |||| ||||| ||| |||
Sbjct 492 TCATCGCCGAAGCCCAGAAAAGTGGCGCCACCTGTGCGTTCGTCGATGCCGAGCATGCTC 551
Query 66091 TCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGC 66150
| || || |||||||| | || || || | || ||| | || ||||| |||||
Sbjct 552 TTGATCCGGAGTACGCTGGCAAACTGGGCGTCAACGTAGACGACCTGCTGGTTTCGCAGC 611
Query 66151 CAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTT 66210
| ||||| || |||||||| ||||| || ||| | | || ||| | |||
Sbjct 612 CTGACACGGGTGAGCAGGCGCTGGAAATTACCGACATGTTGGTACGGTCCAATGCGGTCG 671
Query 66211 CCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACA 66270
| ||||| | || ||||| |||||||| ||||| || ||| || ||||||| || |
Sbjct 672 ACGTCATCATCGTCGACTCCGTGGCGGCGCTGGTACCCAAGGCTGAAATCGAAGGCGAAA 731
Query 66271 TCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGA 66330
| || ||| |||||| ||| |||| || || |||||||| ||||| |||||||| | |
Sbjct 732 TGGGTGACATGCACGTGGGCTTGCAGGCTCGTCTGATGTCCCAGGCGCTGCGCAAGATCA 791
Query 66331 CCGGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGA 66390
|||| | || | | ||||| || | | | || ||| | || |||||
Sbjct 792 CCGGTAACATCAAGAACGCCAACTGCCTGGTTATCTTCATCAACCAGATCCGTATGAAGA 851
Query 66391 TCGGCA--ACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTT 66448
||||| | || | || ||||| || ||||||||||| || || || ||| ||
Sbjct 852 TCGGCGTGATGTTCGGTA--GCCCG---GAAACCACCACCGGCGGCAACGCACTGAAGTT 906
Query 66449 CTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGC 66508
||| |||||||| || |||| ||||| | | || | | ||||||||||| ||||
Sbjct 907 CTATGCCTCGGTTCGCCTGGACATCCGCCGCACCGGTGCAGTCAAGGAAGGCGACGAGGT 966
Query 66509 TGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCA 66568
|| || | || ||||| ||| | |||||||||||| ||||||| ||| ||| ||
Sbjct 967 GGTGGGTAGTGAAACCCGCGTCAAGATCGTCAAGAACAAGGTGGCGCCACCGTTCCGTCA 1026
Query 66569 GGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGGCTGAACTCCTCGACAT 66628
|| || || || | |||||| |||| || | ||| | | |||| || |||| |
Sbjct 1027 AGCGGAATTCCAGATTCTGTACGGCAAGGGTATCTACCGTAACGGTGAAATCATCGATCT 1086
Query 66629 GGCCGTTTCCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAGAA 66688
|| ||| || | || || || |||| || || ||||||| || ||| | ||| ||
Sbjct 1087 GGGCGTGTCTCAGGGCCTGGTCGAGAAATCGGGCGCCTGGTACAGCTACCAAGGCAACAA 1146
Query 66689 CATCGGCCAGGGCAAG 66704
||||| |||||||||
Sbjct 1147 GATCGGTCAGGGCAAG 1162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242379639767996
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |