Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq29157 84.2 2e-11 >seq29157 Length=6873498 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||||||||||||||| || |||| | ||||| ||||| || || | | Sbjct 2566411 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGGCCATCCTCCAGTTGCTTGCCAGCA 2566470 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | || ||||| ||||| || |||||||| || ||| || |||| Sbjct 2566471 AAGATCAGTCTTTGCTGGTCAGGAGGGATTCCTTCTTTATCTTGGATCTTGGCCTTTACA 2566530 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | || || | | || |||| || || | || || || ||||| || || Sbjct 2566531 TTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGATGGTCTTCCCTGTCAGGGTCTTC 2566590 Query 138601 ACAAAAATCTGCAT 138614 | ||||||||||| Sbjct 2566591 ATGAAAATCTGCAT 2566604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496071878661360