Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_011373.1
Length=46872
Score E
Sequences producing significant alignments: (Bits) Value
seq25168 89.7 2e-13
seq8600 87.8 5e-13
>seq25168
Length=1136
Score = 89.7 bits (98), Expect = 2e-13
Identities = 91/116 (78%), Gaps = 2/116 (2%)
Strand=Plus/Minus
Query 14404 CCGGAGACCGGAACCTGGCTGCTCCAAAAGGGGGAGCGGGTAACGACCGCAGAGACGAGT 14463
|||||||| ||||||||||||||||||||||| ||||| || || || || || || ||
Sbjct 1134 CCGGAGACGGGAACCTGGCTGCTCCAAAAGGGTGAGCGAGTCACAACGGCCGAAACCAGC 1075
Query 14464 GCGAAACTCGACAAGACGCTTGATGACGTTCGCTCAAA-TCAGAGTGGCGGTGGTG 14518
|| || | |||| ||||||||| | | ||| |||| |||| |||| || ||||
Sbjct 1074 GCCAAGTTGGACAGGACGCTTGACCAGCTGCGCGCAAATTCAG-GTGGTGGAGGTG 1020
>seq8600
Length=1311
Score = 87.8 bits (96), Expect = 5e-13
Identities = 145/202 (72%), Gaps = 27/202 (13%)
Strand=Plus/Minus
Query 23884 GGGAGGCGAACTGTACGCGGGTTGGCCGACCGGGGGT-AAGGCTCCCGGCACACCCGAAG 23942
||| ||||| |||| |||||||||| | |||||| | |||| ||||| | | || ||
Sbjct 220 GGGTGGCGA-CTGT-CGCGGGTTGGTCAACCGGGAATCAAGGAAACCGGCGCGCACGGAG 163
Query 23943 GTGTCCCACGCACAGCCCGCCATAAAGCGA-------GGGCACaaaaaaaCGCC--CT-- 23991
| | ||||||||||| ||||||| | ||| ||||||||||||||||| ||
Sbjct 162 GCGCCCCACGCACAG-CCGCCATGACACGAGACAGCCGGGCACAAAAAAACGCCGACTGC 104
Query 23992 --------GCGGCGCTG-TGCGCCTTACCGATT-CGGGCGGCCAAGCCCGACCGCTGAAT 24041
||||||||| |||||||| |||| |||| | |||| |||||| |||| ||
Sbjct 103 TTCGCTGAGCGGCGCTGATGCGCCTTGATGATTGCGGGTGACCAAACCCGACTGCTGGAT 44
Query 24042 TTGCAGCGGCAGGC--AGACTA 24061
| |||| || || ||||||
Sbjct 43 TGACAGCAGCCCGCGAAGACTA 22
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 149814140319604
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |