Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq4839 104 2e-17 seq20241 89.7 5e-13 seq11056 82.4 7e-11 seq451 82.4 7e-11 >seq4839 Length=4080137 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || |||||||| | ||||| ||| || |||||||| || Sbjct 529158 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGTTTGCCC 529099 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || ||||||| | |||||| || || || ||||||||||||||| ||| || ||| Sbjct 529098 GCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 529039 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||| || || | ||| | || || |||||||| || Sbjct 529038 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTC 528979 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 528978 TTCACGAAGATCTGCAT 528962 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || |||||||| | ||||| ||| || |||||||| || Sbjct 529614 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGTTTGCCC 529555 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || ||||||| | |||||| || || || ||||||||||||||| ||| || ||| Sbjct 529554 GCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 529495 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||| || || | ||| | || || |||||||| || Sbjct 529494 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTC 529435 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 529434 TTCACGAAGATCTGCAT 529418 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || |||||||| | ||||| ||| || |||||||| || Sbjct 528930 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGTTTCCCG 528871 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | |||| | |||||| || || || ||||||||||||||| ||| || ||| Sbjct 528870 GCAAAAATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 528811 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||| || || | ||| | || || |||||||| || Sbjct 528810 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTC 528751 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 528750 TTCACGAAGATCTGCAT 528734 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || |||||||| | ||||| ||| || |||||||| || Sbjct 529386 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGTTTCCCG 529327 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | | |||||| || || || ||||||||||||||| ||| || ||| Sbjct 529326 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 529267 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||| || || | ||| | || || |||||||| || Sbjct 529266 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTC 529207 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 529206 TTCACGAAGATCTGCAT 529190 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 || |||| |||| || | || || ||||| || || ||||| || || ||||| Sbjct 529863 AAGCGCAGGACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGC 529804 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 ||| || |||||||| || || |||| | | |||||| || || || ||||||||| Sbjct 529803 CCATCTTCCAGCTGTTTCCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCC 529744 Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075 |||||| ||| || ||| | | |||| |||||| | ||| || || | ||| Sbjct 529743 TTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 529684 Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || || |||||||| || || || || |||||||| Sbjct 529683 ATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 529646 >seq20241 Length=2711202 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || |||||||| | ||||| ||| || |||||||| || Sbjct 1753158 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 1753217 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | | |||||| || || || ||||| ||||| ||| ||| || ||| Sbjct 1753218 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 1753277 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||| || || | ||| | || ||||||||||| || Sbjct 1753278 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 1753337 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 1753338 TTCACGAAGATCTGCAT 1753354 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || |||||||| | ||||| ||| || |||||||| || Sbjct 1753386 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 1753445 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | | |||||| || || || ||||| ||||| ||| ||| || ||| Sbjct 1753446 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 1753505 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||| || || | ||| | || ||||||||||| || Sbjct 1753506 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 1753565 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 1753566 TTCACGAAGATCTGCAT 1753582 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || |||||||| | ||||| ||| || |||||||| || Sbjct 1753614 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 1753673 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | | |||||| || || || ||||| ||||| ||| ||| || ||| Sbjct 1753674 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 1753733 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||| || || | ||| | || ||||||||||| || Sbjct 1753734 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 1753793 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 1753794 TTCACGAAGATCTGCAT 1753810 >seq11056 Length=1110308 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || |||||| ||| | || ||||| |||||||| ||||| || Sbjct 356879 GCGCCACCACGAAGTCTCAACACAGGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCA 356820 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || || || ||| || | || || ||||| |||||| || ||||| || ||| Sbjct 356819 GACAGAGTACGTCCATCTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGA 356760 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || ||||||||| ||| || | | | | ||| | || |||| | | Sbjct 356759 GGAATTCCTTCCTTGTCCTGGATCTTGGCCATTACATTTTCTATTGTATCCGAGGGTTTG 356700 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| || | || || || ||||| || || || ||||||||||| Sbjct 356699 ACCTCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 356650 >seq451 Length=5792110 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || |||||| | ||| | || ||||| |||||| | |||| || Sbjct 1082996 GCGCCACCACGAAGTCTCAACACAAGATGAAGGGTGGACTCCTTTTGAGTGTTGTGGTCA 1082937 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || || || ||| || | || || ||||| ||||| || ||||| || ||| Sbjct 1082936 GACAGAGTACGTCCATCTTCCCGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGGTCAGGA 1082877 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || ||||||||| ||| || ||| | | ||| | | |||| ||| Sbjct 1082876 GGAATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTTTCTATCATATCCGAGGGTTCG 1082817 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| || || || || || ||||| || || || ||||||||||| Sbjct 1082816 ACCTCGAGAGTGACGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 1082767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475318249299120