Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_011976.1
Length=43016
Score E
Sequences producing significant alignments: (Bits) Value
seq9203 349 9e-92
>seq9203
Length=13179
Score = 349 bits (386), Expect = 9e-92
Identities = 672/986 (68%), Gaps = 4/986 (0%)
Strand=Plus/Minus
Query 20133 TTTTCAAAATATATCGCGGGCGtttttttATTTCTGTATAAATTCTTCCGATGTACTCAC 20192
|||| | ||||| ||||| | || ||||| || || || || | ||||| || ||||
Sbjct 11524 TTTTGAGGATATACCGCGGTCTTTGTTTTACCTCAGTGTATATGCGCCCGATATATTCAC 11465
Query 20193 CAAGGACACCAATGCCTATTAACTGTACTCCTCCAAGGAAAAGTATTGAAACTAACAATG 20252
| || |||||||| ||||| || || | || ||||| || || || || || | | |
Sbjct 11464 CCAGCACACCAATACCTATCAATTGAATGCCACCAAGAAACAGAATGGAGACGAGTAGCG 11405
Query 20253 ATGGATATCCTGGAACACTATTTCCGAATAGAAGCTTGTCTAAAATCATCCATGCT-CCA 20311
||||||| || || ||| ||| || | | || || || | | ||| | ||| |||
Sbjct 11404 ATGGATAACCAGGCACAGCATTACCCCAGATAACTTTATCAATTACCATGAA-GCTACCA 11346
Query 20312 TAAATGAAGGACGCGCTGGCAACAGCAAGACCGATGTAGGTCCACATTCGCAACGGGAAT 20371
|| | || || | | || ||| | || | || ||||| | || | || |
Sbjct 11345 TACAAAAATGAGCAGGTAGCCACAAACAACCCTAAATATGTCCATACTCTTAGAGGTACA 11286
Query 20372 GTTGAGAAACTTGTTATACCTTCAAGTGCCAGGTTCCATAGTTTCCAGCCATTAAATTTT 20431
| ||| || || ||||| ||||||| ||||| ||||||| ||||||||||||||| |||
Sbjct 11285 GATGAAAAGCTGGTTATTCCTTCAATCGCCAGATTCCATAATTTCCAGCCATTAAACTTT 11226
Query 20432 GAGTTGCCGGCAACACGCTCAGCCCTTGAATACTCAACAACATCAATTTTTCCACCTACC 20491
|| | || ||| | || || || || || ||||| | ||||| ||||| | | ||
Sbjct 11225 GAATCCCCAGCAGACCTTTCTGCTCTAGAGTATTCAACCAGTTCAATATTTCCGCTTGCC 11166
Query 20492 CATGACAAAACGCCTTTCATGAATAGATTGCGCTCAGGAAGTAGTTTTATGTTTTCAACA 20551
|||||||| | |||||||| || | |||||||||||| || || || | ||||| ||
Sbjct 11165 CATGACAATATCCCTTTCATAAACAAATTGCGCTCAGGCAGCAGCTTAACATTTTCGACT 11106
Query 20552 ACTTCTCGCGACATCAAGCGGAAATCACCAACGTTTTCTTCGATTTTAGGGTTGCTAATT 20611
| |||| ||||| | ||||||||||| || || ||||| ||| | || | || |||
Sbjct 11105 GCCTCTCTTGACATTAGTCGGAAATCACCTACATTCTCTTCAATTCTCGGCGTACTGATT 11046
Query 20612 TTGTTGTGTAGCTTATAGAACCACTCAGCCGATTTGCGCTTTAGCCTTCCATCGGTAGAG 20671
|| ||||| |||| |||||||| || | ||| | || | || || |||||
Sbjct 11045 TTATTGTGGCATCTATAAAACCACTCGGCTGTTTTCCTTTTCAACCAGTTTTCTTTAGAG 10986
Query 20672 CGGTCTGCTCTTTTAGCCAGAACCATATCAGCGCC-ATCTAGCCACCTATCAATGAGTTT 20730
|| || | | || || | || | |||||| || | || |||| | ||| || |
Sbjct 10985 CGATCAGTACGCTTGGCTAACACTACATCAGCCCCTAACT-GCCATTTTCTAATAAGCTC 10927
Query 20731 AGGAATAACATCGATAGGGTCTTGCAGATCAACGTCGATTGGGATAACAGCTTCACCAGT 20790
||||| || || || || || || ||||| || || ||||| || ||||| || |||||
Sbjct 10926 TGGAATTACTTCAATGGGATCCTGAAGATCTACATCAATTGGAATTACAGCATCTCCAGT 10867
Query 20791 AGCATTATCAAGACCTGCGAATAGGGCTGGCTCTTTGCCAAAGTTTCTAGTGAACGATAG 20850
|||| || | ||| || ||||| ||||||||||| || || |||| ||||| |||
Sbjct 10866 CGCATATTCTATACCAGCAAATAGCGCTGGCTCTTTACCGAAATTTCGGGTGAAGCTTAG 10807
Query 20851 TGGTACCACTAATTTATCAGATACAGCAAGCGCATTGATGATTGATTCTGTCGAATCGCT 20910
| | ||||| ||| | ||| ||| || || | ||||| | ||||
Sbjct 10806 CGCCATCACTAGACAATCTGCAGTCGCATATTTATTAATAATCAACTCTGTTGCATCGTG 10747
Query 20911 GCTTCCGTCATTGATGAAGACTATCTCAACTTCATGCTCCTTTAGGCCTTCAAACTCGCG 20970
|| |||||||| ||||||| ||| || ||||||| ||| | | ||| || ||
Sbjct 10746 ACTACCGTCATTTATGAAGATTATTTCTACTTCATACTCGCTCAACTCTTTGTTTTCACG 10687
Query 20971 TACCGTTTTATAAAAAATAGGTATCGTGGCCTCTTCGTTAAAGACCGGAACGACTAAAGA 21030
|| | |||||| || |||||||| | | ||||| || || || || || || || ||
Sbjct 10686 AACGGCTTTATAGAAGATAGGTATTGCATCTTCTTCATTGAAAACAGGTACAACCAATGA 10627
Query 21031 AATTTTCATTTCGTATCCCTAAAGACAATGAATTTTGAATAGATAAACCCTGCTACCAGG 21090
|||||||||| |||| |||| ||||| | |||||| || | || || | | || |
Sbjct 10626 TATTTTCATTTTTTATCTTTAAAAACAATCAGTTTTGAGTAAAAGAATCCCACAATCAAG 10567
Query 21091 CTGAGTCCAGAGAATGCAATCAGGGT 21116
|| | | |||| |||| ||||| ||
Sbjct 10566 CTAATTGCAGAAAATGTTATCAGCGT 10541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137479440634068
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |