Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq10790 96.9 4e-15
seq5365 93.3 5e-14
>seq10790
Length=2053270
Score = 96.9 bits (106), Expect = 4e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425
||| || |||| || | ||||| |||| ||| ||| || ||||| ||||| || ||
Sbjct 1303362 GCCACCCCTTAGACAGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGA 1303303
Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485
| ||||| |||| || ||||| ||||| || || | | | ||||||||| | ||
Sbjct 1303302 AATAGTGCAGCCGTCTTCCAGCTGTTTGCCTGCAAACGTGAGCCTCTGCTGGTCAGGGGG 1303243
Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545
| || || || ||| |||||| ||| | || | ||||| || | |||||
Sbjct 1303242 GATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTTGATGGTGTCACTGGGCTCCAC 1303183
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| |||||||| ||||||||||| || || | ||||| |||||
Sbjct 1303182 CTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCCCGAAGATCTGCAT 1303135
>seq5365
Length=1496801
Score = 93.3 bits (102), Expect = 5e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| |||| | ||| | ||||| |||| || ||| | |||||||| ||||| |
Sbjct 701804 TGCCACCTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTCCTGGATATTATAGTCTG 701863
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| |||||||| | || | ||||| ||||| | ||| |||| ||||||||||| | |
Sbjct 701864 ACAGAGTGCGGCCATCCTTCAGCTGTTTGCCCGTGAAAATCAGACGCTGCTGGTCAGGTG 701923
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| || ||||||||| ||| || |||| || | ||||| || | || |
Sbjct 701924 GACTGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAGTGGTGTCACTGGGCTCGA 701983
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | |||||||| |||||| ||| || || |||||||| |||||
Sbjct 701984 TCTCTAGAGTGATGGTCTTGCCCATCAAGGTCTTCACAAAGATCTGCAT 702032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565021397912760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |