Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq18312 109 7e-19 >seq18312 Length=6437 Score = 109 bits (120), Expect = 7e-19 Identities = 300/449 (67%), Gaps = 18/449 (4%) Strand=Plus/Plus Query 15840 ATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCGACCT 15899 |||| ||| || ||||||| || || | || || || ||| || |||||||| Sbjct 1098 ATCTGCTCACGACCCCGAATGTCCGGCAGGCCAACGACGACCTGACGGTCGAAGCGACCG 1157 Query 15900 GGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATA 15959 ||||| || ||||| || |||| ||| ||| || || ||||||||||| | || Sbjct 1158 GGGCGCAGCAGCGCAGGGTCGAGGACGTCAGGGCGGTTGGTCGCGGCGATGACGATGATG 1217 Query 15960 CC-TGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCG 16018 || | ||| | || || || ||||||||| || | |||||| | || || || || Sbjct 1218 CCATCGTTC-ATCTCGAAGCCGTCCATCTCTACCAGCAACTGGTTGAGGGTCTGCTCACG 1276 Query 16019 TTCATCAT-TCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTC 16075 || || | | | || ||| ||||||| || || || ||||| || ||||| Sbjct 1277 CTCGTCGTGGCCCCCGC---CCATGCCAGCACCACGGTGACGGCCGACGGCGTCGATCTC 1333 Query 16076 ATCAATGAAGACGATGCATGG---TTGATT-TTCGCGAGCGACTTCAAAGAGATCCCGTA 16131 || ||||||| |||||| || || || || || || || || | || |||| Sbjct 1334 GTCGATGAAGATGATGCAAGGGGCGTGCTTCTTGGCCTGC----TCGAACATGTCGCGTA 1389 Query 16132 CACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATG 16190 |||| |||| || ||||| || ||||| || || |||| | ||||| || | || | Sbjct 1390 CACGGCTGGCACCGACACCGACGAACATTTCAACGAAGTCCGACCCGGAA-ATGGTGAAG 1448 Query 16191 AAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGC 16250 || || || || | || || ||||| || ||| || || |||||||| ||||| ||| Sbjct 1449 AACGGCACCTTGGCCTCGCCTGCAATAGCCTTGGCCAGCAGGGTCTTACCGGTACCGGGC 1508 Query 16251 TTACCCGCGAGGAGGGCACCTCGTGGAAT 16279 ||| | | || |||| || ||||| Sbjct 1509 GGGCCCACCATCAGCACACCGCGCGGAAT 1537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620504089233360