Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq18312 91.5 2e-13
seq15277 82.4 9e-11
>seq18312
Length=6437
Score = 91.5 bits (100), Expect = 2e-13
Identities = 296/449 (66%), Gaps = 18/449 (4%)
Strand=Plus/Plus
Query 9147 ATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCGACCT 9206
|||| ||| || ||||||| || || | || || || ||| || ||||||||
Sbjct 1098 ATCTGCTCACGACCCCGAATGTCCGGCAGGCCAACGACGACCTGACGGTCGAAGCGACCG 1157
Query 9207 GGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATA 9266
|| || || ||||| || |||| ||| ||| || |||||||||||||| | ||
Sbjct 1158 GGGCGCAGCAGCGCAGGGTCGAGGACGTCAGGGCGGTTGGTCGCGGCGATGACGATGATG 1217
Query 9267 CC-TGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCG 9325
|| | |||| | || || || ||||||||| || | ||||| | || || || ||
Sbjct 1218 CCATCGTTCA-TCTCGAAGCCGTCCATCTCTACCAGCAACTGGTTGAGGGTCTGCTCACG 1276
Query 9326 TTCATCAT-TCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTC 9382
|| || | | | || ||| ||||||| || || || ||||| || |||||
Sbjct 1277 CTCGTCGTGGCCCCCGC---CCATGCCAGCACCACGGTGACGGCCGACGGCGTCGATCTC 1333
Query 9383 ATCAATGAAGACAATACATGG---TTGATT-TTCGCGGGCGATTTCAAAGAGATCGCGAA 9438
|| ||||||| || || || || || || || || || || | ||||| |
Sbjct 1334 GTCGATGAAGATGATGCAAGGGGCGTGCTTCTTGGCCTGC----TCGAACATGTCGCGTA 1389
Query 9439 CCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATG 9497
| | |||| || ||||| || ||||| || || |||| | ||||| || | || |
Sbjct 1390 CACGGCTGGCACCGACACCGACGAACATTTCAACGAAGTCCGACCCGGAA-ATGGTGAAG 1448
Query 9498 AAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGC 9557
|| || || || | || || ||||| || ||| || || |||||||| ||||| |||
Sbjct 1449 AACGGCACCTTGGCCTCGCCTGCAATAGCCTTGGCCAGCAGGGTCTTACCGGTACCGGGC 1508
Query 9558 TTACCCGCGAGGAGGGCACCCCGTGGAAT 9586
||| | | || |||| || |||||
Sbjct 1509 GGGCCCACCATCAGCACACCGCGCGGAAT 1537
>seq15277
Length=4737824
Score = 82.4 bits (90), Expect = 9e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 116985 ATAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 117044
||| || || |||| ||||||||||||||| |||||||| || || ||| || |||||
Sbjct 3365752 ATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTCCAT 3365811
Query 117045 AAAGTCAAATGGATT 117059
|||||||||||||||
Sbjct 3365812 AAAGTCAAATGGATT 3365826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589754298996120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |