Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq30076 95.1 1e-14 seq15155 86.0 7e-12 >seq30076 Length=4501 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/140 (78%), Gaps = 9/140 (6%) Strand=Plus/Plus Query 22483 TAGCTCAGTT-GGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAGTCTCCTA 22541 |||| |||| ||||| |||||||||||| ||||||||||||||||||||| || ||| Sbjct 3671 TAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTC 3730 Query 22542 TTCTCCACTCA--ATCC---TCTTTAGCTCAG-CGGTAGAGCGGTTGACTGTTAATCAAT 22595 | | || || ||| || ||||||||| |||||||| |||| || |||| |||| Sbjct 3731 ACCCCGAC-CATTTTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAAT 3789 Query 22596 TGGTCCCTGGTTCG-ATCCC 22614 ||||| |||||| ||||| Sbjct 3790 TGGTCGTAGGTTCGAATCCC 3809 >seq15155 Length=4091 Score = 86.0 bits (94), Expect = 7e-12 Identities = 105/139 (76%), Gaps = 6/139 (4%) Strand=Plus/Plus Query 22483 TAGCTCAGTT-GGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAGTCTCCTA 22541 |||| |||| ||||| |||||||||||| ||||||||||| ||||||||| || || Sbjct 2431 TAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGGGAGTTCGAATCCCCCT 2490 Query 22542 TTCTCCACTCAAT---CCTCTTTAGCTCAG-CGGTAGAGCGGTTGACTGTTAATCAATTG 22597 | | || || || ||||||||| |||||||| |||| || |||| |||||| Sbjct 2491 ACCCCGACCATATTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTG 2550 Query 22598 GTCCCTGGTTCG-ATCCCA 22615 ||| |||||| |||||| Sbjct 2551 GTCGTAGGTTCGAATCCCA 2569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560392775581200