Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_015295.1
Length=47279
Score E
Sequences producing significant alignments: (Bits) Value
seq6463 98.7 3e-16
seq6053 96.9 1e-15
>seq6463
Length=1127
Score = 98.7 bits (108), Expect = 3e-16
Identities = 100/130 (77%), Gaps = 3/130 (2%)
Strand=Plus/Plus
Query 29845 TGATTACTGCGTTAACGAGCTGTGCTTCATAGCCCAAAGTGCC---GTTTACAAGGTGTG 29901
|||||||||||||||||||||| || ||||||| ||| | ||| ||| || | | ||
Sbjct 616 TGATTACTGCGTTAACGAGCTGCGCCTCATAGCTCAACGCGCCACCGTTGACGATGAATG 675
Query 29902 TTTTTTGAGCCACGGCGAAGGGATTCATTCCCCACTGCGCGGCCTGTAGCGCAACCGCCA 29961
| ||||| || ||||||||||| ||||| ||||||| || || ||| | |||||||
Sbjct 676 TCTTTTGTGCAACGGCGAAGGGGTTCATCTGCCACTGCATCGCTTGAAGCACCACCGCCA 735
Query 29962 GGCAATCAGC 29971
||| || ||
Sbjct 736 TGCAGTCGGC 745
>seq6053
Length=4391
Score = 96.9 bits (106), Expect = 1e-15
Identities = 142/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 37597 CTGGCGAAAGAGTTACGCTGCCCGGTTATAGCATTGTCTCAGTTGAACCGTAATTTGGAG 37656
||||| || || || |||||||| || || | || ||| | ||||| | |||||
Sbjct 815 CTGGCCAAGGAATTCAATTGCCCGGTCATTGCCCTCTCGCAGCTCAACCGCTCTCTGGAG 756
Query 37657 CAGCGTGCAAACAAGCGACCGTGCAATGCCGACTTACGTGAGTCGGGCGTAATCGAGCAG 37716
||||| | ||||| || ||| || ||||||| ||||| || || | ||||||||||
Sbjct 755 CAGCGCCCGAACAAACGCCCGGTGAACTCCGACTTGCGTGAATCCGGTGCAATCGAGCAG 696
Query 37717 GAAGCTGATGTGATTTTCATGGTTTATCGCGACGAGAAGTACAACCCGCAGACAGAGATG 37776
|| || || || || | | || || ||||||||| ||| |||| | || |||
Sbjct 695 GACGCCGACGTCATCATGTTCGTGTACCGCGACGAGGTGTATCACCCCGAAACCGAGCAC 636
Query 37777 AAAGGCGTCACTGAAATCATC 37797
|||||||| | |||||||||
Sbjct 635 AAAGGCGTGGCGGAAATCATC 615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151116065312346
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |