Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_016160.1 Length=36661 Score E Sequences producing significant alignments: (Bits) Value seq19217 113 1e-20 >seq19217 Length=4307 Score = 113 bits (124), Expect = 1e-20 Identities = 334/507 (66%), Gaps = 16/507 (3%) Strand=Plus/Minus Query 12684 GATCCGTCGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAA 12743 || ||| | || || | ||||| ||| ||| || ||||||| | || || ||||| Sbjct 3889 GACCCGGCACTTGACCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGCTTTGGCGAG 3830 Query 12744 AATAACGAACTCTCGTTTGGTGGCTTCCCTGGTACGTCGCTGAT---CAGGAGTTGA-TA 12799 | ||||||||||| || ||||| ||||||| || ||||| | |||| ||| | Sbjct 3829 AGCAACGAACTCTCTTTCGGTGGATTCCCTGCCGTTTCTCTGATTGCCCGGAGCTGACCA 3770 Query 12800 TGCGTCAGAAAACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGT 12859 |||| || | | ||||| || || || ||| || || || || || || |||| Sbjct 3769 TGCGCAAGCACATCATCGCGGCCATCCAGGTGCACGCGGCCGCCGAGTACCCGAAAGAGT 3710 Query 12860 GTTGCGGCGTGGTGGCGCAAAAGAGCCGGGTAG---AGAAATATTTTCCATGTAGTAACC 12916 | |||||| || | || || | | || || |||| || || || || | ||| Sbjct 3709 GCTGCGGCCTGTT---GCTAACCATCGGGCGAGCCCAGAAGTACTTCCCTTGCGGGAACA 3653 Query 12917 TCGCTACCGAGCCGACAGAACATTTTCACCTGTCGCCAGAAGACTATGCAGCTGCTGAGG 12976 |||| | ||| ||| ||| | || | || || || |||||||| ||||| || | Sbjct 3652 TCGCCATGGAGGCGAACGAAGAGTTCCGACTTGATCCCGAGGACTATGCCGCTGCGGAAG 3593 Query 12977 ACTGGGGTACGGTGATCGCCATCGTTCACAGTCACCCTGACGCCACAACGCA-GCCG--A 13033 || |||| ||||||| |||||||||| ||||| ||||| || | ||| |||| | Sbjct 3592 ACCTGGGTGAAGTGATCGGCATCGTTCACTCGCACCCGGACGCTACCA-GCAGGCCGTCA 3534 Query 13034 GCGAACTGGATAAAGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGC 13093 || || || || ||||| || ||| | |||||||| ||| | ||||| Sbjct 3533 CCGCAC--GACCTGGCCATGTGCGAGGCCACGGCGCTGCCCTGGCACATTCTCTCCTGGC 3476 Query 13094 CGGATGGGGATTTACGCACCATCCAGCCGCGCGGAGAACTGCCACTGCTGGAGCGTCCGT 13153 | || || || | | || ||| |||| || | |||| ||||| |||| |||| Sbjct 3475 CCGAAGGAGACCTCAGGACGATCACGCCGTCTGGCGCCGTGCCGCTGCTCAAGCGCCCGT 3416 Query 13154 TTGTGCTTGGACACTTCGACTGCTGGG 13180 |||| | |||| | ||||| |||| Sbjct 3415 TTGTTCATGGAGTTTGGGACTGTTGGG 3389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117150857516438