Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_016562.1 Length=132662 Score E Sequences producing significant alignments: (Bits) Value seq16031 91.5 1e-13 >seq16031 Length=34897 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 39886 TCCACCACCTTGCCATTGTACTTCTTTACTAATACCACCTTGCTCACCTTCTATAACTTT 39945 |||||| |||||||||| || |||||| || || |||||||||||||| || ||||| Sbjct 1606 TCCACCGCCTTGCCATTTCACATCTTTAGAGATCCCCCCTTGCTCACCTTCAATGACTTT 1665 Query 39946 TTTAAGTCTTTCTTTTGTGATAGTTTCTATATAATCCATTTGTTCTATACCTATCCATTT 40005 || || | | || || | ||||| ||||| ||||||||||| || || Sbjct 1666 TTGTAGGCGAGGTACGGTAATTTCATTGATATAGTCCATCTGTTCTATACCAATATATCG 1725 Query 40006 GCGTTTCATTTTATGTGCTACTGCTAAAGTAGTGCCACTTCCTGCAAAAAAGTCCATTAC 40065 ||| ||||||||| || || | || || ||||| ||| | ||| || | ||| Sbjct 1726 ACGTCCCATTTTATGAGCAGTCGCACACGTCGTTCCACTGCCTAGATGAAAATCTAATAC 1785 Query 40066 AAGATCATTTTCATTTGT 40083 | |||||||||||| || Sbjct 1786 TAAATCATTTTCATTAGT 1803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424234743242239