Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_016571.1 Length=284757 Score E Sequences producing significant alignments: (Bits) Value seq8615 86.0 1e-11 seq4096 86.0 1e-11 >seq8615 Length=1762 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 16038 TATGGTGGCCCCGGCGTGACTTGAACACGCGACCAAGCGATTATGAGTCACCTGCTCTAA 16097 |||||||| ||| ||||||||||||||| |||||| ||||||||||| ||||||||| Sbjct 449 TATGGTGGGCCCACCGTGACTTGAACACGGGACCAACGGATTATGAGTCCGCTGCTCTAA 390 Query 16098 CCGTCTGAGCTA 16109 || |||||||| Sbjct 389 CCAACTGAGCTA 378 >seq4096 Length=1707 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 16119 AATGGCGCGCCCTACAGGATTCGAACCTGTGACCAATAGCTTAGAAGGCTACTGCTCTAT 16178 ||||||||||| |||||||||||||||||||||| ||||||||||| |||||||| Sbjct 1586 AATGGCGCGCCTGACAGGATTCGAACCTGTGACCATCCGCTTAGAAGGCGGATGCTCTAT 1527 Query 16179 CC-ACTGAGCTA 16189 || ||||||||| Sbjct 1526 CCAACTGAGCTA 1515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 910744619471160