Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq17400 87.8 6e-13 >seq17400 Length=8471 Score = 87.8 bits (96), Expect = 6e-13 Identities = 123/169 (73%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 24834 TGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATATCGCGAGC 24893 |||||||| ||||||||||| || || |||||||| || || || |||||||| ||||| Sbjct 4233 TGCCAGCTTTACCAGCGCAGTGCCGATGTATTCCTGGGTGTACCCTTCAATATTGCGAGT 4174 Query 24894 TACGCGCTGCTGACCCATTTCTTCGCGGACCAG-CTCGGA-CTGAAGGTCGGCGAATTCA 24951 || || ||||| || ||| | | || | || || || || | || || || || Sbjct 4173 TATGCCCTGCTCACTCATATGATTGC--TCAAGTCTGTGACCTTCAAGTTGGTGATTTTG 4116 Query 24952 TCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGGC 25000 |||||||||| || || ||||||||| | ||||| | ||||| || Sbjct 4115 TCTGGACCGGGGGTGATACACACCTGTATGCCAACCATTTTGAGCAAGC 4067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164112923409424