Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_016761.1
Length=38684
Score E
Sequences producing significant alignments: (Bits) Value
seq4948 203 8e-48
seq4096 87.8 4e-13
seq9311 84.2 5e-12
>seq4948
Length=1101
Score = 203 bits (224), Expect = 8e-48
Identities = 232/312 (74%), Gaps = 0/312 (0%)
Strand=Plus/Plus
Query 36091 CAGGCGCTCGGAAGGCTCAAGACGGGCCAGATGAATAAAACCGAATCAGCTTACTGCCAG 36150
|| |||||||| ||||||| || ||| ||||||| || |||||| | || ||| ||
Sbjct 216 CAAGCGCTCGGCCGGCTCAAAACCGGCGAGATGAACAAGACCGAAGCGGCGTACATGGAG 275
Query 36151 CACCTTGAGCTGCGTAAGCACGCAGGGGAAATCGCCTGGTACCGGTTCGAAGGTATCAAG 36210
|||| | || || || ||| | ||||| |||| | ||||||||| ||||||
Sbjct 276 TACCTGAAAGACCGCCAGTTCGTTGGGCACATCGCATGGTTCAAGTTCGAAGGGATCAAG 335
Query 36211 CTGCGCCTGGCTGATAACACGTTCTACACGCCGGACTTCGCAGTGATGCTAACCAGTGGT 36270
|||||||| ||||| ||||||||||||||||| |||||||| || ||||| | ||
Sbjct 336 CTGCGCCTCGCTGACAACACGTTCTACACGCCCGACTTCGCCGTAATGCTCGCTGACGGC 395
Query 36271 GAGATGGAACTGCACGAGGTGAAAGGATTCTGGACCGACGACGCCAGGGTGAAAACCAAA 36330
| ||||| |||||||||| || || ||||||||||| |||||||||||||||||||||
Sbjct 396 GCCATGGAGTTGCACGAGGTCAAGGGCTTCTGGACCGATGACGCCAGGGTGAAAACCAAA 455
Query 36331 GTCGCAGCAGACCAGTACCCGTTTCGCATCATCGGGGTAACGGTTAAGCCAAAGAAAGCG 36390
| ||| | || ||| ||||| | ||| ||| || || | ||| | || || |
Sbjct 456 GCCGCGCCCAGCCTGTATCCGTTCCAGATCGTCGCAGTCACTGCCAAGACCAAAAAGTCT 515
Query 36391 GGTGGCGGCTGG 36402
|| |||||||||
Sbjct 516 GGCGGCGGCTGG 527
>seq4096
Length=1707
Score = 87.8 bits (96), Expect = 4e-13
Identities = 54/58 (93%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2825 CAGGATTCGAACCTGCGGCCAACCGCTTAGAAGGCGGTTGCTCTATCCAACTGAGCTA 2882
||||||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||
Sbjct 1572 CAGGATTCGAACCTGTGACCATCCGCTTAGAAGGCGGATGCTCTATCCAACTGAGCTA 1515
>seq9311
Length=16340
Score = 84.2 bits (92), Expect = 5e-12
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 2824 GCAGGATTCGAACCTGCGGCCAACCGCTTAGAAGGCGGTTGCTCTATCCAACTGAGCTA 2882
|||||| ||||||||||| ||| ||||||||||||||| ||||||||||| ||||||||
Sbjct 3971 GCAGGACTCGAACCTGCGACCATCCGCTTAGAAGGCGGATGCTCTATCCAGCTGAGCTA 3913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123622096485276
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |