Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_016763.1 Length=43221 Score E Sequences producing significant alignments: (Bits) Value seq698 715 0.0 >seq698 Length=3433 Score = 715 bits (792), Expect = 0.0 Identities = 787/1042 (76%), Gaps = 4/1042 (0%) Strand=Plus/Minus Query 24585 ATGGCAATCACCACTATTGGTAACATCGTAACTGGCAATATCCCTGTACTGGCGTCCTAT 24644 ||| | |||||||| || ||||| ||| | || || || ||||| || ||| | || || Sbjct 1230 ATGCCTATCACCACGATCGGTAATATCATCACCGGTAACATCCCGGTGCTGACCTCGTAC 1171 Query 24645 ATGACGGAAGACCCGGTAGAGAAAACCGCGTTTTTCAACTCCGGAATTTTGACTCCAACT 24704 |||| |||||||||| || || |||||||| ||| | ||||| ||| | || ||||| Sbjct 1170 CTGACCCAAGACCCGGTTGAAAAGACCGCGTTCTTCGAGTCCGGCATTCTCACCCCAACC 1111 Query 24705 CCGTATGCTGCCGAGATTGCCCGCGGCCCGTCTAACATCGCTAACCTGCCGTTCTGGAAA 24764 ||||| ||||| ||||| || ||||||||||| |||||||| ||| | |||| |||||| Sbjct 1110 CCGTACGCTGCTGAGATCGCACGCGGCCCGTCGAACATCGCGAACATCCCGTACTGGAAG 1051 Query 24765 GCTATCGATACTTCTATCGAGCCTAACTACTCGAATGACGTATACCAGGACATCGCGACC 24824 | ||||| | || ||||||| ||||||||||| || || ||| ||| | || Sbjct 1050 TCGATCGACGCATCCGTCGAGCCGAACTACTCGAACGATGTGTACGCCGACGTGGCAGAG 991 Query 24825 CCGCGCGCTATTCAGACCGGTGAAATGATGGCCCGCGTTGCATATCTGAACGAAGGTTTC 24884 |||||| ||| | ||||| || ||| ||||||| ||||| || || ||||||||||| Sbjct 990 CCGCGCAACATTGAAACCGGCGATATGCTGGCCCGTGTTGCGTACCTCAACGAAGGTTTT 931 Query 24885 GGCCAGGCAGACCTGACTGTAGAACTTACCAGCCAGAATCCATTGCAGTCTGTAGCCTCT 24944 |||||||| ||||||||||| || || |||||| |||| || |||| || || || || Sbjct 930 GGCCAGGCCGACCTGACTGTCGAGCTGACCAGCAAGAACCCGCTGCAATCCGTTGCTGCT 871 Query 24945 CGCCTGGATAACTTCTGGCAGCGTCAGGCTCAGCGTCGTCTGATTGCTACCGCCCTCGGT 25004 |||||||| |||||||||||||| ||||||||||| || ||| | || ||| | || ||| Sbjct 870 CGCCTGGACAACTTCTGGCAGCGCCAGGCTCAGCGCCGGCTGTTGGCCACCTCTCTGGGT 811 Query 25005 CTGTACAACGACAACGTATCCGCTACTGATGCATATCACGAGCAGAACGACATGGTGGTC 25064 | |||||||||||| | ||| |||||||| | || ||||||||||||||| || Sbjct 810 ATCTACAACGACAACATCGGCGCAACTGATGCGTTCCATACCCAGAACGACATGGTGATC 751 Query 25065 GATGTTTCTGCAACTTCAGGCTTCGACGCAGGTGCATTCATCGATGCTACCCAGACTATG 25124 || ||||| || || || ||||| || || || |||||||| || |||||||| ||| Sbjct 750 GACGTTTCCGCTGCTGGCGGTTTCGATGCGGGCGCCTTCATCGACGCGACCCAGACCATG 691 Query 25125 GGCGATGCATTGATGGGCAACGGCGGTGAGGTTCTCGGTGCTATCGCGATGCACAGCTTC 25184 || ||||| |||||||| | ||||| |||| ||||| | || ||| |||| |||||| Sbjct 690 GGTGATGCGTTGATGGGGACTGGCGGCCAGGTGCTCGGCGTCATGGCGGTGCATAGCTTC 631 Query 25185 GTATATGCGCAGGCGCGTAAAGCTCAGATTATCGACTTCATCCGTGACGCTGAGAACAAC 25244 || |||| | |||||| ||||| ||||||||||||||||||||||| |||||| Sbjct 630 GTGTATGGCGACATGCGTAAGAAGCAGATGATCGACTTCATCCGTGACGCTGACAACAAC 571 Query 25245 ACCATGTTCGCCACCTACCAGGGTTACCGCATCATCGTCGATGACAGCATGACCGTAGTT 25304 ||| | |||| ||||||||||| |||||| | | |||||||| |||||||| | Sbjct 570 ACCCAGATCGCGACCTACCAGGGCTACCGCCTGGTGATCGATGACCAGATGACCGTGATC 511 Query 25305 GGTCAGGGCA-CTAGCCGTAAATTCATCTCCATCATCTTCGGCCAGGGTGCTATCGGTTA 25363 || |||| || || | || |||||| | | ||||| || ||||||||||||||||| Sbjct 510 GGCACCGGCAGCTCGC-GCAAGTTCATCAGCGTGATCTTTGGTCAGGGTGCTATCGGTTA 452 Query 25364 CGGCGAAGGCAATCCTGAGATGCCGCTGGAATACGAGCGCGAAGCGTCCCGCGGCAACGG 25423 ||| |||||| |||||| || | ||||||||| ||| | | ||||| ||||| Sbjct 451 CGGTGAAGGCTCCCCTGAGCATCCAACCGCCTACGAGCGCCAAGAGGCTCGCGGTAACGG 392 Query 25424 CGGCGGTGTTGAAACCCTGTGGACGCGTAAAACGTGGTTGCTGCATCCGTTTGGTTACAG 25483 ||||| |||||| ||||||| || || || ||| ||||||| ||| | || ||||| Sbjct 391 TGGCGGCGTTGAAGTGCTGTGGAGCCGCAAGACCTGGCTGCTGCACCCGCTCGGCTACAG 332 Query 25484 CTTCACCAGCGCTGTAATCACCGGCAACGGCACCGAGACTATCGCC-CGTTCCGCTAGCT 25542 ||| || ||||||||||||||||||||||| | |||| || || || || Sbjct 331 TTTCCTGTCGGCCACCATCACCGGCAACGGCACCGAGACCA-CGCCGCGCTCTGCCTCCT 273 Query 25543 GGCAGGACCTGGCTAACGCTACCAACTGGAACCGTGTAGTTGACCGTAAGCATGTGCCAA 25602 ||||||| ||||| || |||||||||||||| || | || || ||||| | || | Sbjct 272 GGCAGGATCTGGCGCTGGCCACCAACTGGAACCGCGTGATGGAGCGCAAGCACATCCCGA 213 Query 25603 TTGCGTTCCTGGTAACTGGTGT 25624 | || |||||||| |||||||| Sbjct 212 TCGCCTTCCTGGTTACTGGTGT 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138135201379798