Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_016767.1 Length=60714 Score E Sequences producing significant alignments: (Bits) Value seq4948 154 6e-33 >seq4948 Length=1101 Score = 154 bits (170), Expect = 6e-33 Identities = 201/278 (72%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 52180 CAGGCGCTGGGCCGGCTGAAGCAGGGCGAGAAGAACAACACCGAACAGGCCTACGAGGAC 52239 || ||||| |||||||| || ||||||| |||||| |||||| ||| ||| ||| Sbjct 216 CAAGCGCTCGGCCGGCTCAAAACCGGCGAGATGAACAAGACCGAAGCGGCGTACATGGAG 275 Query 52240 CATCTGGAGTGGCGAAAGCACGTCGGGGAAATCCTCTGGTACAAGTTCGAGGGCGTGAAG 52299 | ||| | || || ||| ||| | ||| |||| ||||||||| || | ||| Sbjct 276 TACCTGAAAGACCGCCAGTTCGTTGGGCACATCGCATGGTTCAAGTTCGAAGGGATCAAG 335 Query 52300 CTCCGTCTGGCTGACAACACCTTCTACACCTGCGACTATTTCGTCATGCTCGCGAACGGC 52359 || || || ||||||||||| |||||||| ||||| ||| |||||||| ||||| Sbjct 336 CTGCGCCTCGCTGACAACACGTTCTACACGCCCGACTTCGCCGTAATGCTCGCTGACGGC 395 Query 52360 CAGCTGGAGGCCCACGAGGTGAAAGGCTTCTGGACCGACGATGCCCGCGTGAAAATCAAG 52419 ||||| |||||||| || |||||||||||||| || ||| | ||||||| ||| Sbjct 396 GCCATGGAGTTGCACGAGGTCAAGGGCTTCTGGACCGATGACGCCAGGGTGAAAACCAAA 455 Query 52420 GTCGCGGCCGATCTCTATCCGTTCCGCTTCATCGCCGT 52457 | |||| || || |||||||||| || |||| || Sbjct 456 GCCGCGCCCAGCCTGTATCCGTTCCAGATCGTCGCAGT 493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194092385404456