Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_017674.1 Length=66275 Score E Sequences producing significant alignments: (Bits) Value seq5325 102 3e-17 >seq5325 Length=2151 Score = 102 bits (112), Expect = 3e-17 Identities = 125/171 (73%), Gaps = 11/171 (6%) Strand=Plus/Plus Query 5494 GAAATCGAATCTATGATCGTGGATGGCCGAGTGATTGAAGCAAAGCCGGCGCGGCAACTC 5553 ||| | ||| | || || ||||| |||||||| ||||||||| ||||| ||||| || Sbjct 556 GAAGTTGAAGCGGTGGTCATGGATTGCCGAGTGCTTGAAGCAAGCGCGGCGGGGCAATTC 615 Query 5554 CGGGTGCCAAACATGGAGGCG-------CCCTGCCGGGAGCTGGACTTGAATGAACCCCA 5606 || |||||||| || ||||| |||||| ||||| || || | |||||| | Sbjct 616 TGGATGCCAAACGTGCAGGCGTTGATTGCCCTGC----AGCTGAACCTGCACGAACCCGA 671 Query 5607 GGCCGTGCAGCGTGATCTTGTCCTTCATCGGGTCATGGACGGTGCTCATGG 5657 |||||||||| | ||||||||| |||| ||| | || | |||||| || Sbjct 672 GGCCGTGCAGGGGGATCTTGTCGGTCATTACGTCGTCGATGATGCTCAAGG 722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 211875862055548