Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_017979.1
Length=43376
Score E
Sequences producing significant alignments: (Bits) Value
seq12120 95.1 3e-15
>seq12120
Length=1614126
Score = 95.1 bits (104), Expect = 3e-15
Identities = 191/277 (69%), Gaps = 20/277 (7%)
Strand=Plus/Plus
Query 958 TTCCATATGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGA 1017
|||| |||| || ||||| ||| ||||||| | || || || || || || | |
Sbjct 1445072 TTCCTAATGGGTGCTATGGGAGAGTAGCTCCACGTTCTGGCTTGGCTGCAAAACACTTCA 1445131
Query 1018 TTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTAT 1077
| ||||| || |||||||| || ||| ||| | ||| || || ||||||||||| | |
Sbjct 1445132 TAGATGTAGGAGCTGGTGTCATAGATGAAGATTATAGAGGAAATGTTGGTGTTGTACTGT 1445191
Query 1078 TTAATTTTAGC---GATAAGCGTTTTCATATTTCAAGA-GGTGATAGGATTGCTCAGTTA 1133
|||||||| || || |||| || | | || | |||||| | | ||| ||| |
Sbjct 1445192 TTAATTTTGGCAAAGAAAAGC----TCGAAGTCAAAAAGGGTGATCGAACTGCACAGCTC 1445247
Query 1134 ATTTGTGAAAAGGCTGTTTTTCCATCCATTCAAATAGTGGA--TTC----CTTAGAGGAT 1187
||||||| || || | |||| | ||| |||||| ||| ||| ||||| ||
Sbjct 1445248 ATTTGTG-AACGGATATTTT---ACCCA--GAAATAGAGGAAGTTCAAGTTTTAGATGAC 1445301
Query 1188 TCGGAAAGGGGTTCTGCAGGATTTGGGTCTACCGGAA 1224
| ||||||||||| | ||| ||||| || || ||||
Sbjct 1445302 ACTGAAAGGGGTTCAGGAGGTTTTGGTTCCACTGGAA 1445338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 138631020480228
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |