Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_018087.3 Length=166687 Score E Sequences producing significant alignments: (Bits) Value seq8615 100 3e-16 seq13800 86.0 7e-12 >seq8615 Length=1762 Score = 100 bits (110), Expect = 3e-16 Identities = 74/85 (87%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 75945 TGGTGGGCCTCCCCAGACTTGAACTGGGAACCAACGGATTATGAGTCCGCTGCTCTAACC 76004 ||||||||| || ||||||||| || ||||||||||||||||||||||||||||||| Sbjct 447 TGGTGGGCCCACCGTGACTTGAACACGGGACCAACGGATTATGAGTCCGCTGCTCTAACC 388 Query 76005 AATTGAGCTAAAGGCCC-AAAAATG 76028 || ||||||| |||||| | ||||| Sbjct 387 AACTGAGCTATAGGCCCTATAAATG 363 >seq13800 Length=12474 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 75945 TGGTGGGCCTCCCCAGACTTGAACTGGGAACCAACGGATTATGAGTCCGCTGCTCTAACC 76004 ||||||||| | | |||| |||| | | ||||| ||||||||||||| ||||||||||| Sbjct 8367 TGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACC 8308 Query 76005 AATTGAGCTAAAGGCCC 76021 || ||||||| |||||| Sbjct 8307 AACTGAGCTATAGGCCC 8291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533065670827560