Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_018269.1 Length=31766 Score E Sequences producing significant alignments: (Bits) Value seq6890 127 4e-25 >seq6890 Length=6377 Score = 127 bits (140), Expect = 4e-25 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 25056 CTTAAATCCATGGCGAAAGAATTTAATTGTCCAATGATCGCGTTATCACAGCTTAACCGA 25115 |||||| || | || || ||| | || || ||| || ||||| |||| ||||| |||||| Sbjct 4795 CTTAAAGCCCTTGCCAAGGAAATGAACTGCCCAGTGGTCGCGCTATCGCAGCTCAACCGA 4854 Query 25116 GGTCTTGAAAACAGACAGGATAAGCGCCCAATTAACTCAGACTTGCGCGAGTCTGGCGCG 25175 || || | | | | | |||||||| || ||||||||||| || || || || || Sbjct 4855 TCCCTAGAGCAACGTCCGAACAAGCGCCCGATCAACTCAGACTTACGGGAATCCGGAGCA 4914 Query 25176 ATAGAACAGGATGCTGATCTAATCGCATTGATATACCGAGACGAAGTGTATAACCCCGAC 25235 || |||||||| || || | ||| || | ||||| ||||| |||||| |||| | Sbjct 4915 ATCGAACAGGACGCAGACGTCATCATGTTCGTTTACCGCGACGAGGTGTATCACCCGCAG 4974 Query 25236 AGCTCTGACAAAGGCATTGCCGAGATTATCATTGGCAA 25273 | | ||||||||||||||||||| ||||| ||||| Sbjct 4975 ACCGAATACAAAGGCATTGCCGAGATCATCATCGGCAA 5012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101492570441568