Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_018279.1
Length=49116
Score E
Sequences producing significant alignments: (Bits) Value
seq5804 251 2e-62
>seq5804
Length=1936
Score = 251 bits (278), Expect = 2e-62
Identities = 382/539 (71%), Gaps = 11/539 (2%)
Strand=Plus/Minus
Query 48548 GAGTGGGT--AAGCCGCCAAATCCTCAGCGATACCGGCAGCATCCATAACCCTGACCACG 48605
|||||| | |||||| | ||||| ||| || ||||||||||||||| ||||| |
Sbjct 1231 GAGTGGCTCCAAGCCG--AGATCCTTGCCGACACGGGCAGCATCCATAACGAAGACCATG 1174
Query 48606 AACACCTGTTAGAGGCTGACCTCTGCTTCATGTGGGCGTC--CGATTCGTTCGCTAAGAA 48663
||||| | || || ||| || | ||||||||||||| ||| ||||| ||| |
Sbjct 1173 CCCACCTACTGGATGCAGACATCCGGGTCATGTGGGCGTCGTCGAGC--TTCGCCAAGCA 1116
Query 48664 AGGGCGGTATGTCCTCGGCCAAGCCGAGCAGGTAATGCTCCGCGCCGGTGGTTGGCAGAA 48723
|| || ||||| || || |||||||||||| | ||||||||||||| ||||||||
Sbjct 1115 GGGCCGCACAGTCCTGGGGCAGGCCGAGCAGGTAGCGTTCCGCGCCGGTGGCTGGCAGAA 1056
Query 48724 AGCCAGAATGGAACAGCAGATGTATGAATGGTTCGGGCGCATCCCGAAGTTCATCATCAC 48783
||| | ||||| || |||||| ||| |||||||| | | ||| |||||||||||
Sbjct 1055 GGCCCGGATGGAGCAACAGATGCGTGATTGGTTCGGTGGTGTGCCGGCCTTCATCATCAC 996
Query 48784 GCTGGCAGCCGATTACTGCTCACAATGCAATGACCTCGAGTTCTGCGCACTGGTAGAGCA 48843
||||| || || |||||| | || |||| ||| ||| ||||| || |||||||||||
Sbjct 995 CCTGGCTGCTGACTACTGCGCCCAGTGCAGCGACACCGACTTCTGTGCCCTGGTAGAGCA 936
Query 48844 TGAGCTTTACCACATCGCACAGGCCACCGATGATTTCGGAGCGCCTAAGTTCAACAAAGA 48903
|||||| |||||||||||||| ||||| ||| | | ||| ||| || | ||| ||
Sbjct 935 TGAGCTGTACCACATCGCACACGCCACGGATAAATACGGCCAGCCAGCCTTTACCAAGGA 876
Query 48904 GACCGGGCATCCATTGCTTACACTGCGCGGCCACGACGTCGAAGAATTCATTGGTGTCGT 48963
| || || ||| |||| || ||||| ||||| || ||| | ||||| ||
Sbjct 875 G---GGAGCGCCGAAGCTGGAGATGCGTGGTCACGATGTCGAGGAGTTCGTCGGTGTGGT 819
Query 48964 ACGTCGATACGGTGCCAGCAAAGAAGTACAGGAGCTTGTTGATGCGGCCAAAGCGCCAGC 49023
||| || |||||||| ||| || || || | | | || ||||| || || || ||
Sbjct 818 ACGCCGCTACGGTGCGAGCCCTGACGTTCAAGCGTTGGTGGATGCAGCAAACAAACCCGC 759
Query 49024 AGAAGTGGCTCACATCGATATAGCCAGGTCATGCGGCACATGCATGTTAAAACTGGCCT 49082
|| |||| | | | ||| | ||| | ||||| || || || | || |||||||
Sbjct 758 CGAGGTGGGGAAACTGAACATATCGAGGGCTTGCGGAACCTGTCTGCTCAAGCTGGCCT 700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156992321360668
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |