Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_019401.1
Length=358663
Score E
Sequences producing significant alignments: (Bits) Value
seq3579 98.7 2e-15
seq11692 96.9 8e-15
seq14890 89.7 1e-12
>seq3579
Length=358
Score = 98.7 bits (108), Expect = 2e-15
Identities = 72/84 (86%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 324508 AGTATATGGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTCAACGG 324567
|| ||| ||||| ||||||||| |||||||||| |||||||||||| || |||||| |||
Sbjct 197 AGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGG 138
Query 324568 TTCGAACCCGTTTAGCTCCACAAA 324591
||||| |||| || ||||||| ||
Sbjct 137 TTCGATCCCGCTTGGCTCCACCAA 114
>seq11692
Length=22366
Score = 96.9 bits (106), Expect = 8e-15
Identities = 73/86 (85%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 324511 ATATGGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTCAACGGTTC 324570
|| |||||||||||||||| |||||||||| |||| | ||| | || |||||| ||||||
Sbjct 7750 ATCTGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTC 7691
Query 324571 GAACCCGTTTAGCTCCACAAAGTACT 324596
|| |||| |||||||||| || ||||
Sbjct 7690 GATCCCGCTTAGCTCCACCAATTACT 7665
Score = 96.9 bits (106), Expect = 8e-15
Identities = 73/86 (85%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 324511 ATATGGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTCAACGGTTC 324570
|| |||||||||||||||| |||||||||| |||| | ||| | || |||||| ||||||
Sbjct 7995 ATCTGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTC 7936
Query 324571 GAACCCGTTTAGCTCCACAAAGTACT 324596
|| |||| |||||||||| || ||||
Sbjct 7935 GATCCCGCTTAGCTCCACCAATTACT 7910
Score = 91.5 bits (100), Expect = 3e-13
Identities = 67/78 (86%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 324514 TGGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTCAACGGTTCGAA 324573
|||||||||||||||| |||||||||| |||| | ||| | || |||||| ||||||||
Sbjct 8268 TGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGAT 8209
Query 324574 CCCGTTTAGCTCCACAAA 324591
|||| |||||||||| ||
Sbjct 8208 CCCGCTTAGCTCCACCAA 8191
>seq14890
Length=1707
Score = 89.7 bits (98), Expect = 1e-12
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 324515 GGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTCAACGGTTCGAAC 324574
||||||||||||||| |||||||||| ||| | ||| | | ||||||||||||||| |
Sbjct 606 GGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCAACGGTTCGATC 665
Query 324575 CCGTTTAGCTCCACAAA 324591
|||||||||||||| ||
Sbjct 666 CCGTTTAGCTCCACCAA 682
Score = 89.7 bits (98), Expect = 1e-12
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 324515 GGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTCAACGGTTCGAAC 324574
||||||||||||||| |||||||||| ||| | ||| | | ||||||||||||||| |
Sbjct 887 GGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCAACGGTTCGATC 946
Query 324575 CCGTTTAGCTCCACAAA 324591
|||||||||||||| ||
Sbjct 947 CCGTTTAGCTCCACCAA 963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1147138811343074
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |