Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_019406.1
Length=279967
Score E
Sequences producing significant alignments: (Bits) Value
seq27765 86.0 1e-11
seq152 86.0 1e-11
seq12812 84.2 4e-11
>seq27765
Length=25252
Score = 86.0 bits (94), Expect = 1e-11
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 132949 GCTCCAAGTTTGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGG 133008
|| ||| |||| |||||||||||||| |||||||||| ||||||||||| ||||
Sbjct 25102 GCCCCAGCTTTGTCGCGGGGTGGAGCAGCTTGGTAGCTCGTCGGGCTCATAACCCGAAGG 25043
Query 133009 TCGAGGGTTCAAATCCCTCCCCCGCATCCA 133038
||| ||||||||||| |||||||| |||
Sbjct 25042 TCGTTGGTTCAAATCCAGCCCCCGCAACCA 25013
>seq152
Length=9724
Score = 86.0 bits (94), Expect = 1e-11
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018
||| ||||| |||||||||| |||||||||| ||||||||||| ||||||| |||||
Sbjct 823 TGACGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTC 764
Query 133019 AAATCCCTCCCCCGCATCCA 133038
|||||| | |||||| |||
Sbjct 763 AAATCCGGCTCCCGCAACCA 744
Score = 84.2 bits (92), Expect = 4e-11
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 132960 GATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCA 133019
|| ||||| |||||||||| |||||||||| ||||||||||| ||||||| ||||||
Sbjct 1059 GACGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCA 1000
Query 133020 AATCCCTCCCCCGCATCCA 133038
||||| | |||||| |||
Sbjct 999 AATCCGGCTCCCGCAACCA 981
>seq12812
Length=1778
Score = 84.2 bits (92), Expect = 4e-11
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 132960 GATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCA 133019
|| ||||| |||||||||| |||||||||| ||||||||||| ||||||| ||||||
Sbjct 386 GACGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCA 327
Query 133020 AATCCCTCCCCCGCATCCA 133038
||||| | |||||| |||
Sbjct 326 AATCCGGCTCCCGCAACCA 308
Score = 84.2 bits (92), Expect = 4e-11
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 132960 GATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCA 133019
|| ||||| |||||||||| |||||||||| ||||||||||| ||||||| ||||||
Sbjct 629 GACGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCA 570
Query 133020 AATCCCTCCCCCGCATCCA 133038
||||| | |||||| |||
Sbjct 569 AATCCGGCTCCCGCAACCA 551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 895422504081960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |