Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_019451.1 Length=66116 Score E Sequences producing significant alignments: (Bits) Value seq5325 102 3e-17 >seq5325 Length=2151 Score = 102 bits (112), Expect = 3e-17 Identities = 123/167 (74%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 5773 GAAATCGAATCGATGATCGTGGATGGCCGAGTGGTTGAAGCAAAGCCGACGCGGCAGCTC 5832 ||| | ||| || || || ||||| |||||||| ||||||||| || || |||| || Sbjct 556 GAAGTTGAAGCGGTGGTCATGGATTGCCGAGTGCTTGAAGCAAGCGCGGCGGGGCAATTC 615 Query 5833 CGGGTGCCAAACATGGAGGCG---ACCGGCCGGAAGTTGGACCTGAATGAACCCCAGGCC 5889 || |||||||| || ||||| | | || | || || ||||| | |||||| ||||| Sbjct 616 TGGATGCCAAACGTGCAGGCGTTGATTGCCCTGCAGCTGAACCTGCACGAACCCGAGGCC 675 Query 5890 GTGCAGAGTGATCTTGTCCTTCATCGGGTCATGGACGGTGCTCATGG 5936 |||||| | ||||||||| |||| ||| | || | |||||| || Sbjct 676 GTGCAGGGGGATCTTGTCGGTCATTACGTCGTCGATGATGCTCAAGG 722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 211367252506861