Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq20974 87.8 3e-12 >seq20974 Length=1049469 Score = 87.8 bits (96), Expect = 3e-12 Identities = 100/129 (78%), Gaps = 4/129 (3%) Strand=Plus/Minus Query 25880 GGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCT 25939 || |||| |||||||||||||| || || || || ||| || || ||||| || || | Sbjct 251031 GGGTGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCGGGATCTTTTGCTGCTATAT 250972 Query 25940 TCTGGCTCAAGCAGAAGGGGACC-ATGCCCGGGCTGTACTTTT-CCAACGAGCTCATCAG 25997 ||||||| ||| | ||| |||| ||||| || || ||||||| |||| || |||||||| Sbjct 250971 TCTGGCTAAAGAA-AAGAGGACTTATGCCTGGACT-TACTTTTTCCAATGAACTCATCAG 250914 Query 25998 CAGGGACGA 26006 ||| || || Sbjct 250913 CAGAGATGA 250905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928488204870720